SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17462c0_g2_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_bifunctional_ATP-dependent_dihydroxyacetone_kinase/FAD-AMP_lyase_(cyclizing)-like,_partial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004371 F glycerone kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006071 P glycerol metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0034012 F FAD-AMP lyase (cyclizing) activity
GO:0039534 P negative regulation of MDA-5 signaling pathway
GO:0044262 P cellular carbohydrate metabolic process
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0050354 F triokinase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.85 TPM:1.81
ORF EntryO_TrvaFAMAMG20750_complete:A_TrvaFAMAMG_TR17462c0_g2_i3
Sequence
(Nucleotide)
ACACAAATCCACAATTATTGAAATATTTCTGCGTTTTTTGACAATATTTATCACATTAGG
TCGTAAACTTCAAGATAATGTGTTATATAATTGATAACGTTGTTATTAGCTAGTGTTATT
GTGTTAATGTAGTGAAGTATTTGTGCTGCGAGCATTTTAAGCAATGTCTTCAACCAAACC
AATAACGAAGAAAATTATAAATTCACCTGAGACATGCGTGGACGATAACCTTCGCGGTGT
AGTTGCTGTCTACCCGCAGTTACAGTTACATCCGAAACACCGCGTCATCACTGTTAGGAG
ACAGCATGACAGCAAAAGAGTAGCTAGCTATACTAGGCGGTGGAGGATCTGGTCACGAAC
CTTTTGCATCAGGTTTCATTGGATCAGGAATGCTTGATGGTGCTATAGCTGGAGGAGTAT
TCGCGTCACCACCCACAGGACATGTTCTATACGGGATAGCACAACTACATAAATATAATT
GTGCTGGAGTTCTAGTTATAATTGGTAACTATACAGGCGACAGATTAAACTTTGGCAAGG
CAATAGAAAAAGCGAAAATAGCTGGAATTAAGGTAGAAGGTCTCATAGTAGGAGAGGATG
TTGCTTCCAGTAAGAACAAGACTGGTGGACGGAGTATGGTGGGAGAAGTACTGTTTTATA
AGTTGTGTGGAGCGATGTCGTTGAAGGGATACGATTTGGACAAAATACGGAATATAGCTA
TCGAAGCGAACAAGAACATGGCTACTTTAGGAGTTTGTCTCAATGCTTGTTCTCTACCAG
GACAGCCACCACTATTCGAGATAGCGGCTGATGAGATGGAGCTCGGAGCCGGGGTGCACG
GCGAGGCTGGCATAGCGAAGGTCAAGATGGGCACCGCTAAGGAAGTCGTCAAGATGATTC
TGGATCAGATTATTGGTCATCTCAAATTATTACCGGGTGACCGCGTGGCTGTCACAGTGG
ATAACTTAGGAGGGACATCGTTTTTGGAAATGAATATCATCAGCGCTGAAACCAAAGATT
ATTTGGAAAACCAAAAAATCCAAGTAGAAAGAATATACTCAGGACATTTGAAGACTTCTC
TTGAGATGCACGGCTTCCAAATATGTCTATTACTTTTAAACAAGGAGTATGGGGATCTCT
TCCTGGAGTTGTTAGATGCACCCACATCGGCTGCTGCTTGGACTGGAGGAGATATCTCTG
TGAAGACTGAGGGTGGACATGGTGATGATGAGAGCTTGCCGAAGGGCGATGTTAGGAAGG
CAGCATCAGGCCCATCATTACCAGAGGAACATCAGAGCCTACTCCGAAGTGCTTTAGTTT
CTGCAGCTGAAGAACTCATCAAGAACGAGCCTCTCCTCAACAAACTGGACTCGGGATGTG
GAGATGGAGACTGTGGGAACACGCTGAAGAAGTTTGGACATGCAATCTTAGAATATGTAG
AAAAGGCGTCACTGCAATATGTGTCCAACGTACTGTGGGACCTCTCGGAGATGGCTGAGA
CGGATATGGGGGGCACTTCCGGTGGCATCTACAGTCTGGGGCTCTCTGCCGCTTCACAAG
TATTTTCCATAGCCACCAACAATGAGGTATCGACATGGCTGACAGCACTGGAATACGCGA
TACAAGCTATTTCTAAATATGGTGGAGCTGAACCAGGAGACAGGACTATGCTGGATACTC
TACATACCGTGGCTGAAATTCTTAAGAAAAACGTTAAAGAAGAATTGGTACATCTTCTGA
AAAAAGCTGAAGAAGCTGCTGAAAATGGAGCCAAAGCCACAGCCAATATGGTAGCGAAGG
CTGGTCGAGCTTCGTACGTCGCCAGCGGATACACACAACAAGAGGACGCCGGGGCAAGAG
CAGCCGCGCTTTGGTTGCAAGCCATATTCACTTCTGTTGCTAATAAAATATGATCTATAT
TCTAAAA
(1927 bp)

- SilkBase 1999-2023 -