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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17454c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_thrombospondin_type-1_domain-containing_protein_4-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001527 C microfibril
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0031012 C extracellular matrix
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.19 TPM:1.16
ORF EntryO_TrvaFAMAMG20721_complete:A_TrvaFAMAMG_TR17454c1_g1_i3
Sequence
(Nucleotide)
CCGACTCAGTCCACTCCCCCTCGGAGTGACCGATGGGCACCGACCAGATAAAATAATGAT
TTATTATTATGATGAAACTAAATTCTAAAAGTGACTACGAAAAAATATGAACACTACTAT
TATGACACATTACTTAAAAATAAATACTTTTACATTGAATTCTCCAATTCCTTTAGATTT
AATAGAAAGTCAAATTCTCGAAATATTATGATTGTTATTGTGAGAAAAAAAATCCTGTAT
TAAAAAATGTTACGTTCATTTAAAATAATAATTTGCAAATTTATCTTTTTTGTCCGTCGG
TAAATTCAAAGAAATTAAGTTCAAACTTAAAATGAGATTACAATACAATATTTATTGCTT
ATAAATTATAAGGGATGCTACATCCCTCTGCAGGAATAACAACAGTTTTGCACGTAGAAG
TTGTAATGGCAGAGACGGGCTTGCACTGCTAGAAGACAGTTGTTTAGTTTATCTTCGCAT
TCTTTAGGTCCAGTCTCTCTGATTATGGGTCGAGTGCTTGTAGTGATAACTTTTTGAGAT
TCTATAGTCAAATCAGGCGGTAAAGTGGAAACAGTAGGGCATCTCAATTCGCAAGTTTTT
TGCGCGTGAGGTCTGATACCACTGCAGTCTGATTCGCCAGCGCCATTGGTGTCACCGTGA
GCACAAATTACTGACCGAGATTGGAACCCGAGGGTTGAGGAACAATTACCTGTACACTGT
CCCCAATCACTGAAGTACCAAGTGGGAGGACACTCGGTGCCACACTCCCTGACGTGATCA
GGCTTGGGGCTTCTGCAGGCGGAATCCCTGAGATGTCTACCAGTACCGCCGATGCAGAGA
ACTCCTCGGACCTGTTTCCCTTTGCACTTCGAAGTACATTGTGACCATTCACCAGTAAAC
CACTGCCCCTCAGCAGATTCACATGCAAGGCCTGGGGTACAACTCCTGCTGGTTTGAGGC
TCCTTCCTCGGAGCACATCCTGAAGGATCAGTGCATCGGACTGATCGTGTTTGAATACCT
CCACCCACGCACCATCCAGTACACTCCGACCATTCTGTGTAAAGCCAGCCAGCTGCCGCA
TTAAAACTATATTCTGGGCCAATGTCAGAATCTGTAGTATTGATGGACACCGTAAATATT
GGGCCTTCACGGAATGTGTCAGTGTCTTCCTTATTTCTAGTTCTCTTTGGCTCAATACGC
CTTACTGGGCCAGCGCTTGAACCATCGCAACTTGGGATGTTACATAATTCTGTTGTGGGC
GGCTTCGGAGGTGGACATTTGTGGTCACTTATCTTAGTGATTCCTTTGGAATGATCCTGC
ACGCATCCTACGATCCTAGTTCGAGTAGCAGGTCCACATCGAGGACATGAAGACCAGGCA
GCAGCTCTCCATCTTGGCGGGCAGGGTACATTGCCACATCGACGTCTTCTACCTACTGGC
GGTGATCCAACACAGTGGACAGAGGAAACTTCCCGATCTCCGGAACTCGTGGATTCTACG
CACCTGTACTTCCCAAGCTGAAATCCACCACCGCAAGTTCTTGTGCATTGTGTGAACGAC
AATATTTTCCAAACAAACTTTCTACTGCCAATGATATTAGCTTCTATTCCAGTTTCACCA
CTAGATTGATCTTTCGAAAGACTAGGATGATCCATGCTCCTGTGGACATTTACTGATGAT
CTTGGATGCGCATCAAAGTTGTGATGTCTACGTGTATGTTTGGTAATAACAGCTGGTGGA
TCTGGTATATCAGGGGTTATGTCATTTCCAACACCATCAGGAGAATCAGTGAAATATTCA
TACTTTATGTTGGGTTTTGGTTGTGTATACAGTATCATAATATCAATAGAATGATATATA
GGCCCATTAGCATACACATTGTCGAGTCCTCCCACACGTGTGTATAAAAATCTGGCTCCT
GCTGCTTCATACATTCCGGGAGCACTTACGGCAAATTCTCCATTCAATATGTACGAACTA
TTCGTCAGTCTCAGGGCGATATAATTCTCGCTTGGTATTAACTCAGTCACGTTGATCCGA
CAGGCTCCTCGTGGGACAGTAGCCACCAACGTATATCCCAACGGTAGTCGAGGTTTAGTG
AACAACCCTGACACAAGTCTTCTTCCACATCTGAGCTGCTGGATACTGTTGCCTGCTAAT
ACAGACTCTCGTCCAATTACCTTACAAGTACCTTGCACACATATCGCGGGGAGTCCATTT
TGAGTGCACGGTGTTCCATCATCAACTACTGATAGTGTAGCATAGAAATGCTGACCCATC
GGCCTACAGTTCAATACGCAGGGTGCATTACCATCAATATAAGGAGTCCATGTGTAGAAT
CGTCCTCTGAACGGTCTTCTATCAAAAGCAGCGCATTGCTCTGCGCGAGTATTCAGAACT
CCTCCAGGGCAAGGCTGTGTATTGCACTCGTGAAATCTCTTATCTACCCCAATACAATCA
CTGTGGATCTGTCTTGTAACCCGAACTGTTAAGACGGGCGCTTCTGTGCTGTTTACTTGA
AGATTACGAGGTGTTGGTAGCCTCGGCACACATCGTCTCTCCTGTACTGATACTCCTCCT
CCACAGGTTCTCGAACAAGGAGTCCATCGACCCCAAGAACTCCACGCGTACCCCGGACTT
GACGGCTCTATTGTCGCCATCTCTGCAGGTGCAGGAGTCGTTGTAACATTTGATGGAAGA
TCTGTCATCGCTATTTGAATTAAAGCTGCTATCCAGAACAAATCCCGCAGAAACAGCCCG
TTCTCCATTT
(2770 bp)

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