SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17454c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_thrombospondin_type-1_domain-containing_protein_4-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001527 C microfibril
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0031012 C extracellular matrix
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.00 TPM:0.98
ORF EntryO_TrvaFAMAMG20717_complete:A_TrvaFAMAMG_TR17454c1_g1_i1
Sequence
(Nucleotide)
CCGACTCAGTCCACTCCCCCTCGGAGTGACCGATGGGCACCGACCAGATAAAATAATGAT
TTATTATTATGATGAAACTAAATTCTAAAAGTGACTACGAAAAAATATGAACACTACTAT
TATGACACATTACTTAAAAATAAATACTTTTACATTGAATTCTCCAATTCCTTTAGATTT
AATAGAAAGTCAAATTCTCGAAATATTATGATTGTTATTGTGAGAAAAAAAATCCTGTAT
TAAAAAATGTTACGTTCATTTAAAATAATAATTTGCAAATTTATCTTTTTTGTCCGTCGG
TAAATTCAAAGAAATTAAGTTCAAACTTAAAATGAGATTACAATACAATATTTATTGCTT
ATAAATTATAAGGGATGCTACATCCCTCTGCAGGAATAACAACAGTTTTGCACGTAGAAG
TTGTAATGGCAGAGACGGGCTTGCACTGCTAGAAGACAGTTGTTTAGTTTATCTTCGCAT
TCTTTAGGTCCAGTCTCTCTGATTATGGGTCGAGTGCTTGTAGTGATAACTTTTTGAGAT
TCTATAGTCAAATCAGGCGGTAAAGTGGAAACAGTAGGGCATCTCAATTCGCAAGTTTTT
TGCGCGTGAGGTCTGATACCACTGCAGTCTGATTCGCCAGCGCCATTGGTGTCACCGTGA
GCACAAATTACTGACCGAGATTGGAACCCGAGGGTTGAGGAACAATTACCTGTACACTGT
CCCCAATCACTGAAGTACCAAGTGGGAGGACACTCGGTGCCACACTCCCTGACGTGATCA
GGCTTGGGGCTTCTGCAGGCGGAATCCCTGAGATGTCTACCAGTACCGCCGATGCAGAGA
ACTCCTCGGACCTGTTTCCCTTTGCACTTCGAAGTACATTGTGACCATTCACCAGTAAAC
CACTGCCCCTCAGCAGATTCACATGCAAGGCCTGGGGTACAACTCCTGCTGGTTTGAGGC
TCCTTCCTCGGAGCACATCCTGAAGGATCAGTGCATCGGACTGATCGTGTTTGAATACCT
CCACCCACGCACCATCCAGTACACTCCGACCATTCTGTGTAAAGCCAGCCAGCTGCCGCA
TTAAAACTATATTCTGGGCCAATGTCAGAATCTGTAGTATTGATGGACACCGTAAATATT
GGGCCTTCACGGAATGTGTCAGTGTCTTCCTTATTTCTAGTTCTCTTTGGCTCAATACGC
CTTACTGGGCCAGCGCTTGAACCATCGCAACTTGGGATGTTACATAATTCTGTTGTGGGC
GGCTTCGGAGGTGGACATTTGTGGTCACTTATCTTAGTGATTCCTTTGGAATGATCCTGC
ACGCATCCTACGATCCTAGTTCGAGTAGCAGGTCCACATCGAGGACATGAAGACCAGGCA
GCAGCTCTCCATCTTGGCGGGCAGGGTACATTGCCACATCGACGTCTTCTACCTACTGGC
GGTGATCCAACACAGTGGACAGAGGAAACTTCCCGATCTCCGGAACTCGTGGATTCTACG
CACCTGTACTTCCCAAGCTGAAATCCACCACCGCAAGTTCTTGTGCATTGTGTGAACGAC
AATATTTTCCAAACAAACTTTCTACTGCCAATGATATTAGCTTCTATTCCAGTTTCACCA
CTAGATTGATCTTTCGAAAGACTAGGATGATCCATGCTCCTGTGGACATTTACTGATGAT
CTTGGATGCGCATCAAAGTTGTGATGTCTACGTGTATGTTTGGTAATAACAGCTGGTGGA
TCTGGTATATCAGGGGTTATGTCATTTCCAACACCATCAGGAGAATCAGTGAAATATTCA
TACTTTATGTTGGGTTTTGGTTGTGTATACAGTATCATAATATCAATAGAATGATATATA
GGCCCATTAGCATACACATTGTCGAGTCCTCCCACACGTGTGTATAAAAATCTGGCTCCT
GCTGCTTCATACATTCCGGGAGCACTTACGGCAAATTCTCCATTCAATATGTACGAACTA
TTCGTCAGTCTCAGGGCGATATAATTCTCGCTTGGTATTAACTCAGTCACGTTGATCCGA
CAGGCTCCTCGTGGGACAGTAGCCACCAACGTATATCCCAACGGTAGTCGAGGTTTAGTG
AACAACCCTGACACAAGTCTTCTTCCACATCTGAGCTGCTGGATACTGTTGCCTGCTAAT
ACAGACTCTCGTCCAATTACGAAAACTAAGACGATGTAAAGTAGAGCGGATGTCCCCATC
CTTGGAGATCTCGTGTCGATTTTATGGATAAAACTTTATATTTCACTTCTGTAAACGTTC
ATGCTTAAATTTGAAACATATTTAAAGTATCTGTAGGTAAGTTTTTAAAATGAAAATCGT
ACTTGTCGACTACAATTTTTTAAACATTTAAGTGCATTATTAGTTTAGGCGAAAAGCTAT
TTAAAAGTCTAAAATTGCACAGCATCGTTGGCGTAACAACGTATTTAGATCTTGCATTTC
TTTTGCGAACTTAATTTATATACTACCTAATTGTTTGGTTGGT
(2503 bp)

- SilkBase 1999-2023 -