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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17451c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Fanconi_anemia,_complementation_group_I_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016020 C membrane
GO:0031398 P positive regulation of protein ubiquitination
GO:0036297 P interstrand cross-link repair
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:2.69 TPM:2.64
ORF EntryO_TrvaFAMAMG20701_5prime_partial:A_TrvaFAMAMG_TR17451c0_g1_i2
Sequence
(Nucleotide)
AGTGGTGTTGTGAAAAATTGCACATAAATCTTTTTCACATTTAGATTTAGAGGTACAAGC
CGTACGACATCACACATTGAGAGCTAATAACTTCCCGAAGTTGAAACGATAGCTTTCTAG
AAACAACACTAAAGTAGTTATAAAATTGAAGTGGCGTGCAGCTTATTCGAAGCCAATAAG
CACCGCATACCTTACTTTGTAAAGATATATTGAAAAATATCACTAAATACAAAAGCAAAC
AGCTATTTATTTTCTATAAATATTAAATCTATCGTCTATACACGACCCTTCTCAAAAGTC
GAATGGTACTTGGCAATAAATTCGAAGTTACATTCTAGCTTTTTCTCTGTCGTTTTGTGT
CAGTGGCGACGTCATCATTGTTATCTGAATCTCCGTCTACTTCCTCTGGCTCTTCTTCAT
TACCGCTGCCCAAATGGACGGTTTCCGCGTCATTTATATCATCTCTCGTTTCATCATTAT
CATCTGATCCGTCGGCGATGTTCAACACTTGCTGTAGGATCTCTCCATTGATTCTGAAGT
CCCGAGCGGTGCCCAGCGAAAGATATTGTTGCCAATTCAACTCTGCCTTATCAGCCAGCA
ATATAACATGTTTAGCGTATTGTTCTGCTTCGAGAACTAATTTCGGTATAAGTTTAGTGT
CCCGTTCAACTTTTCGCGCCGAATTGAGCTCTTGAGATGACCCGAGGTACGTTATAAAAT
TATCTTTAATGGTGGATAACTTTTTGCCGCTTAGTTTTAGAAGTCGATCGAACCTAGCAT
TCTTAGCCATGGCAACATTGATCTGTTTAGCGAGTGTTGCCAGCGTGGAGTACAACTTGA
CACAAGTGGCCAGCACTCGGCTGCTGCTCGCTCCGATGGTGCAGCGGAGAGAGACGACGC
GCGATATCCACGTACACACTCGACACATGTGGATCACTGTCGACTCGTATAGCTCTTTTA
GTTCTCTCTCTATCCTTTGTCTATTTTGTTGCGTAGCGCTGACTGTAGCAAGATTCAAAT
CCCTTGCTCTGTGTAACAAATGCTCGACGGTCACCATCCTGTCGTTCAAATGAATACAAA
TGTGGTTCAAAACGGTGTGAGCTGATACATCTGTGATGGACGAGAAATGTGAAGATTCTT
CGTTTCTTGATGTGTCTTCTTCATCAATCTTGCCCAGTACTTCAGTGAGTTTGCTCAGTA
CATCTTCTAGGAACAACGCTTCCTGTTGTTCCCTGCACCCCGCTACTAATAGCGCAGGCA
ACATTGATAGACAATCGTGATCCGTTTTACGTACGTAATCTTCATATTTGACTAATACAC
TAGTAGTTTCAGCAGTAGATATCACGGGTTGTTCTAACAGCAAGCTCGCTGTATTAACAA
GGCTGACTGCCAATTTCTTAGAGTCGCTTCCTTCGTGCGCGGTTTCATCTTCCATCTGTA
TGAGACAGGATAGTATCTGTTCCAGTATTGTAGCTATGCACGCAGATGGTAAAGCATCGG
GTTGATCCGCTACAAATACACCTGCTGTATAATAACCGGCATAGACTAACAACATGTATG
GCTACGTCACGTTTTTCTAGATCGGTTTTAGCGAGCACTGCGAGAATGCACCTTAATGTC
CAGTGATGAAAGTCCCTTTTAGCGCGGAGCTGATTACGCTGATCATTTGTACTCCAGTGT
ACGTGTTCACCATATAGTAAATCAGCAATTCTAACACACAGTTTCAAGTCCCATAGACAA
GGGAGAGGTTTAAATGGAGTTCCTCTATCTTTGACCATATTCGAAAGTTTCTTAGGACTT
TTAGTTTTATCCTTCGCTTTTCCTTGAGATTTCTGACTTTTGTCTATGGTATCTTTGGTT
TCATTTAAGGATTTCCTGCGCTTTTTGGCTAGTTTTGACGGGGCCTTCGTTTTTTCAAGT
AATTGATCGTAGTCCTTATAAAGTTTATAAACTGTATTCGCGATATCAGTACTATTGCTG
TTCCACTGCATTATCTGATACGCGATGAGAGTCTCATACATTTGCAGTAATTGTTGCACT
TTTAGACATTTCGCTTTAGATTCTGGCGTCAAATCCGTTAAGCCGGGGTCATCCGGTTCG
TGGCCGCCACTCCAGAACTTTTCGGCCCCAACGGCCATCTGTT
(2143 bp)

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