SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17451c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Fanconi_anemia,_complementation_group_I_isoform_X1_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016020 C membrane
GO:0031398 P positive regulation of protein ubiquitination
GO:0043240 C Fanconi anaemia nuclear complex
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:3.10 TPM:3.03
ORF EntryO_TrvaFAMAMG20698_complete:A_TrvaFAMAMG_TR17451c0_g1_i1
Sequence
(Nucleotide)
AGTGGTGTTGTGAAAAATTGCACATAAATCTTTTTCACATTTAGATTTAGAGGTACAAGC
CGTACGACATCACACATTGAGAGCTAATAACTTCCCGAAGTTGAAACGATAGCTTTCTAG
AAACAACACTAAAGTAGTTATAAAATTGAAGTGGCGTGCAGCTTATTCGAAGCCAATAAG
CACCGCATACCTTACTTTGTAAAGATATATTGAAAAATATCACTAAATACAAAAGCAAAC
AGCTATTTATTTTCTATAAATATTAAATCTATCGTCTATACACGACCCTTCTCAAAAGTC
GAATGGTACTTGGCAATAAATTCGAAGTTACATTCTAGCTTTTTCTCTGTCGTTTTGTGT
CAGTGGCGACGTCATCATTGTTATCTGAATCTCCGTCTACTTCCTCTGGCTCTTCTTCAT
TACCGCTGCCCAAATGGACGGTTTCCGCGTCATTTATATCATCTCTCGTTTCATCATTAT
CATCTGATCCGTCGGCGATGTTCAACACTTGCTGTAGGATCTCTCCATTGATTCTGAAGT
CCCGAGCGGTGCCCAGCGAAAGATATTGTTGCCAATTCAACTCTGCCTTATCAGCCAGCA
ATATAACATGTTTAGCGTATTGTTCTGCTTCGAGAACTAATTTCGGTATAAGTTTAGTGT
CCCGTTCAACTTTTCGCGCCGAATTGAGCTCTTGAGATGACCCGAGGTACGTTATAAAAT
TATCTTTAATGGTGGATAACTTTTTGCCGCTTAGTTTTAGAAGTCGATCGAACCTAGCAT
TCTTAGCCATGGCAACATTGATCTGTTTAGCGAGTGTTGCCAGCGTGGAGTACAACTTGA
CACAAGTGGCCAGCACTCGGCTGCTGCTCGCTCCGATGGTGCAGCGGAGAGAGACGACGC
GCGATATCCACGTACACACTCGACACATGTGGATCACTGTCGACTCGTATAGCTCTTTTA
GTTCTCTCTCTATCCTTTGTCTATTTTGTTGCGTAGCGCTGACTGTAGCAAGATTCAAAT
CCCTTGCTCTGTGTAACAAATGCTCGACGGTCACCATCCTGTCGTTCAAATGAATACAAA
TGTGGTTCAAAACGGTGTGAGCTGATACATCTGTGATGGACGAGAAATGTGAAGATTCTT
CGTTTCTTGATGTGTCTTCTTCATCAATCTTGCCCAGTACTTCAGTGAGTTTGCTCAGTA
CATCTTCTAGGAACAACGCTTCCTGTTGTTCCCTGCACCCCGCTACTAATAGCGCAGGCA
ACATTGATAGACAATCGTGATCCGTTTTACGTACGTAATCTTCATATTTGACTAATACAC
TAGTAGTTTCAGCAGTAGATATCACGGGTTGTTCTAACAGCAAGCTCGCTGTATTAACAA
GGCTGACTGCCAATTTCTTAGAGTCGCTTCCTTCGTGCGCGGTTTCATCTTCCATCTGTA
TGAGACAGGATAGTATCTGTTCCAGTATTGTAGCTATGCACGCAGATGGTAAAGCATCGG
GTTGATCCGTTATTTTGGGCAAGAAGAAATCCAGTTTGAATGAGTATTTGTTAGAGAATA
ACAAACTAAGGGACGCTTTGAACACCTCGATGCAATATACAGTCGTCTGATCGTCGAATT
CACACATCTCACTGAACCTACAAATACACCTGCTGTATAATAACCGGCATAGACTAACAA
CATGTATGGCTACGTCACGTTTTTCTAGATCGGTTTTAGCGAGCACTGCGAGAATGCACC
TTAATGTCCAGTGATGAAAGTCCCTTTTAGCGCGGAGCTGATTACGCTGATCATTTGTAC
TCCAGTGTACGTGTTCACCATATAGTAAATCAGCAATTCTAACACACAGTTTCAAGTCCC
ATAGACAAGGGAGAGGTTTAAATGGAGTTCCTCTATCTTTGACCATATTCGAAAGTTTCT
TAGGACTTTTAGTTTTATCCTTCGCTTTTCCTTGAGATTTCTGACTTTTGTCTATGGTAT
CTTTGGTTTCATTTAAGGATTTCCTGCGCTTTTTGGCTAGTTTTGACGGGGCCTTCGTTT
TTTCAAGTAATTGATCGTAGTCCTTATAAAGTTTATAAACTGTATTCGCGATATCAGTAC
TATTGCTGTTCCACTGCATTATCTGATACGCGATGAGAGTCTCATACATTTGCAGTAATT
GTTGCACTTTTAGACATTTCGCTTTAGATTCTGGCGTCAAATCCGTTAAGCCGGGGTCAT
CCATACTAATCCGTTCAATCTCATCGTTTGAACACAACTTCTGCATAATGTTATTGAGTT
TGTTTTTCAAAAGTGCGGTTCCGTTTTCAGAGTTACTCGCTAAAATATCTTCGTCGTCAT
CTATTTGATCCGGCTGAAGAAATTGACTTACAACATACAGTAGATTTGATATAGGTTCTA
TAAGAGTGGCGTTGATAGCCCCAACTTGAACACACTTGTCTAATAGCAAAGAGTTATCTT
CAGACAAGTATTTACTCAAGTGCTCATAGAGAAGTTCCAATATCAGTTCGTGTAATGCAA
CTTTTTCTTGAGAACAATCGTATAACTTTGTATAAAGTAGTTCTTTAACAAGAGCGTCTT
GCATTAGACATCTACGAAGAATAGAAACGACCTCCATACAAACGGCTTCATTGCGCACTC
TTGATGTCACCGGTGTGCCTTGCTGTGAAGCGTGAAAATCGACAGCTATCTGCGTCAAGT
ATGAATTAGCGCTGTACTGTTCGCTGCTCTCGCTCTGACTGCACGAGAGCGAGCGAGATA
GACGCACGTGACGTAGCACTGTTAGGAAACCAGATAGAGCCAGGCAGCGGTGATATGAAT
CTCTAGAATACAATCCTTTTCTACACACCATAACCAACGTGTCCCTGGTTCTTGTACTGA
AATTGATGAGGTGCCTCACTGAGTCTAATACACTGGCACTCAACCTATAGTCTGAGTTAG
TTGGCTGACAATTCTCTAATATCATACTCAGTTCAGTACGACCTTCCACTGATGCTGGTG
TTAATTTACAGAGGACTTGAAGGCAATCTGCATACTGTTTCTGAGCATTCTCTCCGGCCA
GTCTATCAGCCAAATTACTAAGTATGTACGGCACCGTCTCTCTCTGTGACTTACTCAGTC
GCACCAGTATTAACTTCCCGTGGGACCAACATGCTTGAGCGACTGGCTTTATAGTAGATA
CGGATAGAAGGGAGAAGGCTAGGTTTATTAAGCCTAAGGACAGTTGGTAGTTGGCACTGT
CAGTGGTAAGTACTTTAAGTACGCTAACTATATCAACATCAGGCGGCATTATAGATCGCA
CCCACGCTGACTTTTTACGTTTTATATCGTCCATCTCTCGTAATTCTATCGCTGATTTTA
TTATATTCAAACAAACAGTTCTATAATCGGTTCCTTTATCAGACATAACCAGTGCCAAGT
CCATCAAGAAAGGAGACCTCAGCAGTTGTGTTTTGGGCCACAGTTTGAGGTGTTTCCGTA
CAAGTTCCGGGTCGACCGGGCCTTGTGATATATGGAAAATGCAGTTGGATAAACATTGAC
TGTATTCTGCTGTTGTGTGTGGTACAATGTCGTCAACATCCATTGTAGTTGACTCAGAGT
CCTGTGGAGGTGGTTCCAGTTTACCAAACAAGCCCACATTGAAGTAATGACTTAGGTGTG
ACAACACTATATCCAGATTGTAGAATTTGCACAACCTCATCAATTGTAATGTAAGTGGAG
GTAAGGTTTCTGGAGCAACTTTAATTATGAATGAACACATCTTGTTCACAACTTGCGTAT
GATCAACTCTCGTTAGATTCATATCTGTAAACATAGCTGCTAGTTGAACTAAATGCTCTT
CCTTCCATTGGAATTGACATAAAGTGTGGACACACTGAGTTTTGTAGTCTATACTAGTCA
TCTCTGTATCGTAATGCTTGACTGTGTCATAGTTTAGTAAAGAGTTCATACATTCTGGTA
CAATATCACGCCAAATCATGTTCACATCATTATCTTCAACGATAGACTGTATGCTATCAT
TGCACCATCTGACCAGATCATCGCACGGTAACTGTGGAAGCTCCAGGCAGAGTCTGCTGA
TGATGTTAACGCAGTGTGTCAACGATGTTGATTCCTTTCTCATTGTTTGTAACGTTATGT
CTATTATCTTTATTGTGTATTTCTTTGTCGTTTCTGTGAGTCCATTAAAGATGTAATTAA
GGATTTGTCCTCCATCAGCATTTAGTAGACGTCTCGGCAAATATTTTATGATTTGAACTT
AAATTTTATACCAGACTGAAGCCCTTGCGGTTCGGTGTAGTTCCAGTCTTCTCGTTGATG
AAATCTTGAAGCTATTTGACTAGTAACGATATGATAGTCCATTTTACAATAATTTGACTT
TGATTCAGAATAGTAAGGAGTATCGCGATTTGCAAATCAAAATATAACAAAGGAGTCTGA
TC
(4442 bp)

- SilkBase 1999-2023 -