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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17443c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_muscle_calcium_channel_subunit_alpha-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006936 P muscle contraction
GO:0008331 F high voltage-gated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042045 P epithelial fluid transport
GO:0046872 F metal ion binding
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
Transcript
Level		FPKM:0.51 TPM:0.50
ORF EntryO_TrvaFAMAMG20630_5prime_partial:A_TrvaFAMAMG_TR17443c1_g2_i1
Sequence
(Nucleotide)
GGAAGATCCTGTGGCGAGCAACGTGGCCACTCTTACGGGGATGAGTGAGGTTCTCCGTAA
CATAGATTACTTCTTCACCGCTGTGTTCACGGCGGAGCTGATGTTAAAGCTCATCACATA
CGGCTTCATTCTCCACAAGGACGCCTTCTGTCGTTCCGGTTTCAACTTGCTCGATTTACT
GGTCGTTATAGTGTCGTTGATATCTTTGTCTGGAACAAGCAATGTTGGTTTCATTAAGAT
TTTGAGGGTATTTCGAGTTTTAAGGCCGCTCCGTGCTATTAACAGAGCAAAAGGGCTAAA
GCACGTAGTACAATGCGTGATCGTTGCTATAAAGACGATTGGCAACATTTTATTGGTCAC
CAACCTCCTACAGTTCATGTTTGCAGTAATGGGAGTGCAAATGTTCAAGGGCAGATTCTT
CAGATGTACGGATATCACTAAAGTCAATGTAGACGAATGCCACGGTTCTTACCTTATTTA
CGAGAATGGAGTCCCGAAGACTGAAGAACGATTATGGCTAAGAAATAAATTTAATTTCGA
TGATGTTTTGAATGGTATGCTGACGCTTTTCACAGTATCTACTTATGAAGGATGGCCACT
GCTACTATCCACGTCAATGGACTCTAACAAAGAAAACCACGGACCTATAGAGAATTCTAG
ACCTTTTGTTGCGTTCTTCTATATCAGCTATATCATTGTCATCGCTTTCTTCATGGTGAA
CATCTTCGTAGGTTTCGTCATAGTCACATTCCAGAAAGAGGGAGAACAAGAATTCAAGGA
TTGCGAATTGGACAAGAACCAGAGAAACTGCATTGAGTTTGCATTGAAAGCGAAACCTAT
TAGACGATACATTCCAAAACACCGTATCCAGTACAAGACGTGGTGGTTCGTGACGTCACA
GCGGTTTGAATACGGAATATTTTTCTTCATCGTTCTCAACACTATTGCTCTTATGATGAA
GTATTATGGAGCCAAACCTGACTATCAGACGGTACTGGATACCCTGAACATGGGTTTAAC
CACTGTGTTCACTTTGGAGTTTATTTTCAAACTGGCTGCATTTAGATTTAAGAATTACTT
CGGTGATTCGTGGAATACAACAGATTTCATATTAGTACTGGGCAGTATATTTGATATTCT
TGTAACACAATTAGAAGAACATAAGACTGAAACTTCTGAAGGAAACTCTAATGCACTATT
ATTAAAATACATAACCTTCTTCCGTCTCTTCCGAGCTTTACGTTTGATAAAACTGTTATC
AAGAGGAGAGAGAATAAGAACTTTGCTGTGGACCTTCATCAAATCATTCCAAGCGCTGCC
TTACGTCGCCCTACTCATTGTACTTCTGTTCTTCATTTACGCTGTGGTCGGCATGCAGCT
TTTCGGAAGAATTCATCCAGATAATGAAGTGATTACAGAAAATAACAACTTCCAAACGTT
TTTGAACGCACTTATGTTGCTGTTTCGATCCGCCACAGGAGAAGCATGGCAAGAGATCAT
GATGGCTTTATCTCCGAATATCTATGAACGTCCAAACGACCCCGCACGTTGCAGTAAAAT
TGACACTGATGGTACCTATGTGGCTGATGAGTCGTCCAACTGTGGTACTTGGCTTGCGTT
CCCGTACTTTATATCATTTTCTCTACTTTGTACATTTTTGATTATCAACTTGTTCGTTGC
GGTCATTATGGACAACTTCGACTATTTGACAAGAGATTGGTCAATTCTTGGACCTCATCA
TTTGGATGAATTTGTACGGTTGTGGAGTGAATATGATCCTGATGCTAAGGGGAAGATCAA
GCATTTGGATGTCGTGACGCTGTTGAGGAAAATCAGTCCGCCCTTGGGTTTCGGAAAGCT
CTGTCCTCACAGGACGGCCTGCAAACGTCTTGTGTCCATGAACATGCCTCTTAACTCAGA
TGGAACTGTCAACTTCAATGCCACGTTGTTCGCTGTCGTTAGAACACAACTGCAGATTAA
AACTACAGGTGTTATCGACGAGTGTAATACTCAACTCCGGGCCATCATCAAGAGGGTCTG
GAAGAGGACTTCCAATAAACTCCTGGACCAGGTCGTTCCACCTCCAGGAGACCCCAACGA
GATCACCGTTGGAAAGTTCTACGCCACCTTCCTCATCCAAGATTACTTCAGAAGGAACCA
TGCATTTAGAAAACGAAAAGAACAAGCTGCCGTAACTGAAGCTAAAAAGAACACACTTCA
AGCTGGAATGAGAACATTACACGAAGCCGGTCCAGCTCTCAAACGAGCTATATCTGGGAA
CCTTGATGAGATTGAAGAAGTGGTGGAACCTATGCATAGGCGAAACCACACACTATTTGG
TGCTGTCCTGGCAAGTATAAAGAAACATGGCCGAGAAAGTTTCTACGGAAGAGAAAAACC
ACGACAAGAAATGAAAAATTCTGCATCTGCTGACGGACCTTCGTTAGGAGCCATGATGCG
ACGGGAACTAGGCATGGACGGAAGAATACCAGAAGATGAAGGAAAAGTCGATGACGGTAA
CCACAGCGACGAAGAAATAGCGATGCAGCCATTATTACAAGGGAAAGACTCGGAAAGCAT
CTTCAAAGTTATAGAGTCGTGACAAACAGCGTGTACAGATGAACCACGTGCCTTATTGTG
TAGAGAATCCTGCGGAAAAATTGATAACGGGGGTGCTGACAGAGCACGGCCTAGGGAAGT
ATTGCGACAAAGACTTCATCGAGACCACTCTGAGGGAGATGAGGGAGGCACTCGACCTCA
CGCCGAACGAAATGGACACTGCGGCAAGCCAAATAATAATGCAAGAGAGAGAAGAAAAC
(2819 bp)

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