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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17434c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sin3_histone_deacetylase_corepressor_complex_component_SDS3_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016580 C Sin3 complex
GO:0019899 F enzyme binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:3.15 TPM:3.09
ORF EntryO_TrvaFAMAMG20562_complete:A_TrvaFAMAMG_TR17434c0_g1_i2
Sequence
(Nucleotide)
AAAACATCTTTCAACATTTCAATCTGCTGGTTTTGTTCAGTAGAAGTTTGGTTCAGTAAA
TTCAGGTTTTGAACTAAATTAATTTTATGAGTGACACAACTGGCTTCAGCCATTTGTTGC
CAGTGCTACGGTCGTCGCTTCTGAAGCGTATAATTTATTTGTGAAGCGGTGATTGCATTC
AATCTGTATGCAACTGTTACGCGTCGCCTCGACTATGTCTTACCAAGGATCACCATATTC
GGGCCCGGGGGATGAATACGACTTCGAGGACGACGGGTACGACGATCTAGATGAGTTTAG
GGAGCGAGCAGAGATTCCACCGCGGCCCACACCAGCAGATGACAGCGATGAAGATACAGA
AGAGGCAAGTGAGGCAGAATTACCAAATAACAATGAGCCTTTGGAAGTTAAAGAACAAAT
ATATCAAGACAAACTTGCCAACTTCAAGAAACAATTGCAACAACTGGAAGATGGATTACA
TCCAGAGTTTCTACGGAGAGTGAAGAGATTGGAACATCAGTTGCAAGAGAGATTACGGCT
CAACAGGATATATAAAGACCACATGTACGAAGTAGTGGAAAGAGAGTACATAGCAGAGAA
AAAGGCCGCTGCAAAAGAGTTTGAGGAGAAGAAAGTAGAATTACGAGAGAATTTACTCAA
TGATTTTGAAGACAAGAGGAAATTGATTGAGAGTGAGAGACACAGTATGGAGCTAAATGG
AGATTCTATGGAGGTTAAACCAGTAATGAAGAGGATACTACGAAGGCGAGCCAACGAACC
AGCGCCGGCGCCAGAGAAACGACGTAAACCACTCGCAACCACCCTCACCTTCCAACTAGA
CGAGCGAGATATAGACGCGGACATCCGCGCTATACAGCGGACCACGCCGCCGCGACACGC
TGTACAGCACAACACTGTACCGCCCAGGAAACATCTCAACTCTGGCAGCACTTGCGACTC
GCCGGTCCGCGAGAGCGAGACGTGCGACGCGCGCGTGGAGGACGGCAAGCTGCTGTACGA
GCGGCGGTGGTACCATCGCGGACAGAGCGTGTACGTGGAGGGACGCGACCTGCCCAAGTT
CCCGGGACACATACACGCCATCACTGATGAGGCGATATGGGTGAAGAAAACAAACGTGGA
CCGAATACGGATATACATATCTCAGTTAGCGAGAGGGAAAGTGACGTTGAAACGAAGAGC
CTCATAATTGTGAATATTAACTTAAGGTGATATGTTTTATACAGTGCTAATAGTACAATC
AGCCTCATTAGTTCATATCTATACTTTAGAATAAAGCTAAAGAGTTTGTTTTAAAAATTC
TTTTAGTGTTCAATAGTTCATTTATCGAGGAAGTTTATACGCTATATTACCTTTGTGACG
TAGACGAAGTTGTGTGGAAATGCAAAATTCGCACGATAAAGCAGTGACGTGATTAGTGCT
TAACGCGTCGTGCTGGATTCTGTCTTCATTCGAACGAGTGTGATCGTCGTTTTAGTGCGT
TTCAACTCTCACATATCCGGCGGTATAGGAATCCAGCAATTTTCTCCAATTCAAGTAATT
TAGAAGAAGAAAACCTTTATTGCTGTAGCAAAACGACTTACATCAGCATAGATTTGTGAA
TGTTGTCAATACATAATGAGTGCACTAATAAGGCTGATTGTACACAGTGATATGTGTTAC
ATACGTGTGTGAATGACTAGATCGACGCTAGTTTTGTGTATATCTGTACGTATAGTGTTT
TGTTATCTTGGATATGTGACAATGGATTGATGTTCTTTTGAACTGTAATAATATGAACTC
AAAATGTTGATTGTGAAAACTGTGTTTTTGTAATGTTTAAATAATGCAAAGACAGTAGAG
AAGAAATATTCATTGCTTTCTGTTAATTACTTAAAAAATTATTGAAAATATTTTTAAAAC
ATTAGAGTGATGTTAAGGAATTTAAATTCTATTTTATTTAGTCATGTCTTCTTGATTTCT
TAATTTTTTTATAGTAAGTCTAAAATTTCAGTTGTACTTTTTTATAAAATTTGAAAACAC
AGTTTTTG
(2048 bp)

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