SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17433c2_g2_i10
Scaffold_id
NCBI non-redundant
(nr)		retroelement_polyprotein_[Lasius_niger]
Ontology
GO:0000145 C exocyst
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008013 F beta-catenin binding
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0098793 C presynapse
Transcript
Level		FPKM:1.36 TPM:1.33
ORF EntryO_TrvaFAMAMG20554_complete:A_TrvaFAMAMG_TR17433c2_g2_i10
Sequence
(Nucleotide)
AATATATTACAAAAAAATCAAGAATAAAGAGAAAATCGTTTTATCAGAAAAATTTAGTAT
AAACTTTATAAAAAAAATACATATAGAATACTGTCACATTGGAATTAAACAAATGCAGAA
TAAAATTATACCATATTACACATCTAAGAATTTGAAACTGAATATAGAGAAAATATGTAG
ACAATGTGAAACTTGCATTATGAACAAATCAAGAGGTCAAAAAAAATTTGGTTTAATGTC
ATATCTAGGACCTGCCACACGCCCGTTTGAAATAATGTCTATTGACACAATTGGTGGGCT
GGGGAGTTCAAGATCGACAAAAAAATACATGCACCTCTTGGTGGATCATTTTTCTAGATA
TGCATATATTTTAAATTCAAAAACACAGAATTCAAATGATTTTATAAAACTTGTCCAAAA
TGTCACAGAATATGGCAATATTGGTATGATCTTAACAGATCAATACCCAGGAATAAATTC
AAAGGATTTTAAACTTTTTTTACAGGAAAAGAATATTTCAATTGTTTTTACTGCAGTCAA
TGCCCCTTTTTCAAATGGAATTAACGAAAGGCTTAACCAAACCTTGGTAAATAAAATAAG
GTGCAAATTAAATGAACAGAAGAAGAAAGTAGCGTGGACAACAATAGCACAAAAATGTGT
AGAAAGTTATAATGAGACGGAACACACTGTGACAGGTTTTGCACCGGTGTACTTACTACA
AGGAAAAAATATTGCATTTATACCAGAAGAGCTAAAAGAAAAAAAACCAGAAAGGGATTT
ATCGGCAGATAGAAAATTGGCACTGAAAAATAGTATAAAATCCCATAACTACAATAAAAA
GATATATGATCAAAATAAAAAACATTATCAGTTCAATGTAGGAGACATTGTATATGTGGA
AAATGGCAACAAGTTAAACAGAATAAAACTTGATGAGCTGAAAATTGGACCATATGAAAT
AATAGAGAAGGTTTCAAACTCAATATACAGAGTGAATACAGGACATAGGAAATCAGAATC
GAATCTCTTCCACATTTCCAAACTAATACCGGCTCCTGCACGTGAAGATGGTAGTTTAGA
GAGTAAACAATAAGATTTTATGCTAAAATTATCTCCGTGAAAGGGGGGATGTAAGATATG
ATTAGATCATCTCTTAAATTTGAATTAACCCGCGCTATTTAAAGCGCGAGTGAATAGAGA
ATGACAGGTGAATGAATTGTATGAGTGAAAGGAATGTCTAGGATGTAAACTGACGTTTTG
CAGATCGTTGATATTTTGAAAGTAAAATTATTGTGTGTGTCGAATAAAATACCTGAAGAT
TAGATTAGAGACGATATTTGTGAAAGTATAAGCTTTGAATGTTGTTTCTTTAATTACAGG
TAAAGTAATACTTGTTTTGTAACATGTACATTATGTAGTTAGGTTATTTCGTGTAAAACA
CGTGTTTTTAACAATAAAAAAATCTTTAATTACAGAAACGCAATTGAGTTTATTTGTGAA
TATCGATCACCTTATTTAAAGGATCTTATATAAATTAAACGTATTTAATACAAGTTATAT
TTAAAGTTAATATTTTTGATAAATAAAATTAGGCAGCTTCATCGAAATATCCATCCAGTT
GGGTCGCGATCTGCACGGGCGAGTACTTGACGTACTTGTCCGGGTTCTTGGAGAAGGGCA
GCGCGGCGACGGCGTCGTGGAAGGCGGTGTAGGTCGGCAGGATGGCCTGCTTGTTGTCGC
GCTTGAGAGCCTCGCGTAGCTCCGCGTCGGGCACGCTGTAGCCGCGCTGGAGGCGGGTGC
ACTCCTCCCACTCGCGGTTGAACGACGAGAATTTATCTTTCAGCATCTGTCTGTCTCTGT
CCCTCAGTTTAGCGGGTAACGGCTCATCCAATTGCAAATGAGACAATAACTTGTTCCAGC
TCTGTAGATACGCGTTTTTATGTTCTTGTATCATATCTCTGTAGTTGGTCTCACAATCAG
GTTCGGCGAGACACAGGATCTCAAGTAATCCTGTTCGTTGTAAACCCTGCAATAGATAAA
GCGTATTATTGAGGAGGAAGATAGCTTTCAGCGCATCCGAATATTGCTCACTCTTATTAC
GAAGAGCGAAGTTTAATTGAGCTAGCACTTTTCTCATGTAAACAGCAAGTACCGCTGCGT
TCCTATCGTGCGAGGCGGGGAGTTGACTCACGGCGCGCTGGTACGCCGGCTCGCTGTACA
GGGCCGGCCCTAACAACAACCATCATCATCAGCCTACAGACGTCCACTGCTGGACATAGG
CCTTCCCCAAACCTCGC
(2297 bp)

- SilkBase 1999-2023 -