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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17433c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		retroelement_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:4.24 TPM:4.16
ORF EntryO_TrvaFAMAMG20534_internal:A_TrvaFAMAMG_TR17433c1_g2_i1
Sequence
(Nucleotide)
TGGGTTGGATATGATAAAACAATTTAAATTGATTCAAAATGAAAAGTTAGAAATTTCACA
AAAAAGTAAAAATGCAGAAAGGAAAATAGGAAAAGAAAATATAAAAAGTTATAGCAAATT
CAATGTGAACTTTAACGAACATGTCGATGCAACCAATTTTAGGATTTTAATGAACCATCT
CCAAAATGAACAAGAAATAAAAATAAACCAATTAATTGAAAAATACAAATCAATCTTTGC
AAAAGACAAATATGACATTGGAACTGTCAAGGATTTTGAAGCCAGAATTGATTTATCAAT
TGATAAATACTGTAGTAAAAGACCTTATAGATGCAATATTAATGATAAAAAAGAAATAGA
GAGTCAAGTATCAAAGTTATTGGAGAAAAATCTTATAGAAGAATCCTATAGTCCATTTGC
TGCTCCAGTAACATTGGCATTCAAAAGAGAAGACAATAGAAAATCAAGACTTTGTATAGA
CTTCCGGGATTTGAATAAACTGGTTATTCCACAATCACAACCATTTCCATTAATTGAAGA
CCTGATGGTAAAAACAAGGAATTGCAAATATTTTTCTGCACTTGATATAAATTCTGCATT
TTGGTCGATACCGTTACGAATCGAGGATAGAAGAAAAACAGCTTTTGTAACACAAGACGG
CCATTATCAGTGGACTTGCTTACCATTTGGACTGAAGACATCTCCAGCCATCTTTCAAAG
GATATTAAGTAATATTATAAGACGACATGAACTTACAGAGTTGACAGTAAACTTCATCGA
CGATATTTTGATTTTTTCAAAGTCATTTACCGAACACTTAACACATTTAACAAAATTATT
TGAAGCCATAAAGAAGGAAGGCTTCAGATTGAAATTTTCTAAATGCACATTTGCATCTGA
TACAGTAAAATATTTAGGGCATATTATTCATAACAATTCAGTAAGCCCAATAAAAGATAA
TTTAATATCAATAAAGAATTTTCCAGTACCACAAAATCAGAAAAATGTGAGACAGTTCTT
GGGAAAAATAAATTTTTATAATGAATATATACCAAATAGTGCAATAACATTAGATCCACT
ACACAACTTGTTGAGGAAGAATCAAAAATTTATTTGGACAGAAGAATGTCAAAAATCGTT
TGAAAAAATGAAAAATCTATTGTGTTCTCAACCTATTTTAGAGATATTTGATCCGGACCT
ACCAATACTAATTTATACGGATGCAAGTATTCTAGGCATTGGAGCAGTATTGAAACAGAG
ACAACAAAACACAAAAGAAAAACCAGTTGCATATTTTTCCAAGAAGTTGAATGAGGTACA
GAAAAGAAAAAAAGCTATTTATTTAGAGTGCTTAGCAATAAAAGAAGCAGTTAAATATTG
GCAACACTGGCTTATAGGTAAACGATTTACGATTATTACTGATCATAAACCGTTGGAGAA
AATGAATATTAGATCGAGAACAGATGAAGAACTTGGAGACTTAACATATTACCTCTCTCA
ATATGACTTTGAGATAAAATATTCTCCAGGTAAAGATAACCTTGAAGCCGACTGCTTGAG
TAGAAACCCAGTGTTAGAAGCACATGAAAATGAAGGAGAACAGTTAAGAGTGGTAAATTG
GATAAAACTGGAAGATATTATTATTGATCAAGAAAATAATGAAGAATTACAAAAAGGAAA
AGGACAATTAATATTGAAAAACACAATATATTACAAAAAAATCAA
(1725 bp)

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