SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17433c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		gag-pol_fusion_protein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.60 TPM:0.59
ORF EntryO_TrvaFAMAMG20533_internal:A_TrvaFAMAMG_TR17433c1_g1_i1
Sequence
(Nucleotide)
TGGGTTGGATATGATAAAACAATTTAAATTGATTCAAAATGAAAAGTTAGAAATTTCACA
AAAAAGTAAAAATGCAGAAAGGAAAATAGGAAAAGAAAATATAAAAAGTTATAGCAAATT
CAATGTGAACTTTAACGAACATGTCGATGCAACCAATTTTAGGATTTTAATGAACCATCT
CCAAAATGAACAAGAAATAAAAATAAACCAATTAATTGAAAAATACAAATCAATCTTTGC
AAAAGACAAATATGACATTGGAACTGTCAAGGATTTTGAAGCCAGAATTGATTTATCAAT
TGATAAATACTGTAGTAAAAGACCTTATAGATGCAATATTAATGATAAAAAAGAAATAGA
GAGTCAAGTATCAAAGTTATTGGAGAAAAATCTTATAGAAGAATCCTATAGTCCATTTGC
TGCTCCAGTAACATTGGCATTCAAAAGAGAAGACAATAGAAAATCAAGACTTTGTATAGA
CTTCCGGGATTTGAATAAACTGGTTATTCCACAATCACAACCATTTCCATTAATTGAAGA
CCTGATGGTAAAAACAAGGAATTGCAAATATTTTTCTGCACTTGATATAAATTCTGCATT
TTGGTCGATACCGTTACGAATCGAGGATAGAAGAAAAACAGCTTTTGTAACACAAGACGG
CCATTATCAGTGGACTTGCTTACCATTTGGACTGAAGACATCTCCAGCCATCTTTCAAAG
GATATTAAGTAATATTATAAGACGACATGAACTTACAGAGGTGACAGTAAACTTCATCGA
CGAT
(784 bp)

- SilkBase 1999-2023 -