SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17428c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_11-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.93 TPM:2.87
ORF EntryO_TrvaFAMAMG20485_5prime_partial:A_TrvaFAMAMG_TR17428c1_g1_i1
Sequence
(Nucleotide)
GAGAGACATGTCATAGCGCTCCGGGAGCACCGCGGATGGGAGTCCATTCCAAATCGGAAT
GGTTTGAGTGCCAATTGCAGTTCTTTACAAGTTTACTTTATGTCCTGATGTTTTATTTCC
AAGTCAGCAATAATAAAATGAAATATTTTTTTGTTGATTAACTTTCATATATTGTATTAT
TCTATGTATGTATGATATTTATTGCTTTTTTAATCCCGAGATATCAATGTTTTGATCGCA
GTCTTTCAGGCTTGGATTATCTTCATCAATTGGTTCACAATGCACCTCTACCATAGATGA
ATCCAATACTTCTACACCAATGTATGGTGAATTATATTCTAGTGATTTACTTTTTTCAGC
AATATACATTGCATCAGCATGGCACCCCTTCTTCTTAAAAACATGATGTTTCAACAGAAC
ACTGTTGAAGAACTCTTCACCGCACACACACAAGTAAGACTGCTTCTTTTCCGATTGATC
ACTGTGTGCATGCATAGTCCTTACATGACGTTTCATTTCCTTCTCATTCCTACAAATCTG
ACGGCATATCACGCAAACCCTAAGATTGTACAAACGTATACCTTTCAAACCGATATAAAT
ATCATAACAGCTAAATTTGTGTACTCTTGTAAAACAATGCTTGTATTTTTTTGAGCCTCG
CAAACTGACATTGTCTTCTTTATGCTTCTGTAAATGTTGCACATAGTAAGATTTCCTTGT
CGTTGTGTAGTTGCAAAACGTGCAATTGAAATAGGGTATGTGTGATTGTAAATGGTCGTT
TAGTAAGAGTGCAGTGCCGCACCGTTTCGCGCAAATCGGGCAGGTTGTCCTGTCGTTTAT
GTCGTGCAGATTGCTCATGTGAAACCATGTTTTTTTGAAAGACATCTGCTTGTGGCATAG
TTCGCAATCGATGTCCATTCTTGATTTTATGTGTCTGGAGTGTATGTGGACAGTTAAAAG
GTACTTATTGAAGAACAACGAGTTGCAGTAATCACATATGTATATCTGTCTTTCTATTTT
CTGTGCGTGAGGTGATGATAACAAATGTATAGTTTTGATGTGAGTAAGGAGGTTGACTTC
TGTATCCTGAGGCCTAAGACATATCAAACACATGAAATTACTTTTACACCTCATCTTTGA
TTTTAACTCCATTATGTGCACTTTTTTTCTATGCAAATCTAGTTCTAATTCGGACAACCA
AGTCGTTTTGCAAAGTTCACAAGAAAACACCTCTTCAAGATTGGTAGAGTTTTTAATGGG
AACTCTTACTAAATCAGTGTATGATCGAAACATCGTTTTTAATATAGTAAATACTGTTTT
GAAGTTACTTTTAGTTGGGACTTGAATTTGAAATGCTTTATCTGTTTCGGTATTCAATAA
AATGAAAAAATACAAAACTGTAAACAAAGTGTGTTGACAGCGTTGGTT
(1428 bp)

- SilkBase 1999-2023 -