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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17424c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nucleolysin_TIA-1_isoform_p40_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008143 F poly(A) binding
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0042036 P negative regulation of cytokine production
GO:0044822 F RNA binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0097165 C nuclear stress granule
GO:1903608 P protein localization to cytoplasmic stress granule
GO:1904037 P positive regulation of epithelial cell apoptotic process
Transcript
Level		FPKM:0.41 TPM:0.40
ORF EntryO_TrvaFAMAMG20468_complete:A_TrvaFAMAMG_TR17424c1_g1_i3
Sequence
(Nucleotide)
GGTATATGGCCTGATTCAGAAGGCGGTCGTTCTTGACACGAGCACTATCACATTTTCGTC
GGTGACTTGAGCCCGGAAATTGAAACCCAGAGCTTAAGAGATGCCTTCGCGCCATTCGGA
GAGATATCTGACTGCCGCGTCGTTCGAGATCCACAAACACTGAAATCAAAAGGATATGGA
TTCGTCTCCTTTTTGAAAAAATCAGAGGCAGAGTCAGCCATCACATCTATGAACGGGCAG
TGGCTAGGATCCCGGTCTATTCGTACTAACTGGGCCACACGGAAACCACCGGCGCCGAAA
AATGAATTAGGTCCCGGCTTGGGCGTTCCCCTTGCCTTGCCGATGACGATGTGCGGCGGT
GACCACTTTACATCAGGTGGACTGCATACTCGTCTGCCTTCGATGGCTATGAAGAGAGTG
AACTCGAAGCCTCTGACATTCGATGAGGTGTACAACCAAAGCTCGGCAAGCAACTGCACG
GTGTACTGCGGAGGTCTGACCACTGGTCTCACTGAAGAACTCATGCAGAAGACATTCCAG
CCGTTCGGGACTATCCAGGAGATCAGAGTCTTCAAGGACAAGGGATACGCTTTCATCAGA
TTCTCGACCAAGGAAAGCGCTACGCATGCCATAGTCGCCGTTCATAACACTGACATCAAC
GGTCAGCCCGTGAAGTGCTCCTGGGGCAAGGAATCCGGCGATCCGAACAATTCGCAGGCT
CAAGGACAATTGGGCGGGACTGCGTACAGTCCATTCGGGACCGCGTACACCGCCGGCGGA
GTGCCCCCTGCTTCGTACTGGTACAACACGTACCCGCAGCAGATCGGAGGGTTCCTTCAA
GGAGTACAAGGAGTCCAGGGGTACACTTACGCTGGACAATTCGGGTACCAGCAGCAATAT
ATGGGGATGGGCGGTGTTCAGATCCCGTGGGCGCTGGGTGGCGGTGTGGGTGGTGTGGGT
GGCGTGGGTGGAGTGGCCGCCATGTCTCAACCGCCACAGGTGCTTCACTACCCGGTGCAG
CACTTTCAAGTGCAGCCCATCGGAGAGGATGAATGGCTCGCCCCAAGCCTCCTCGTGTGA
GGTCAACGACCAGCACCCACTGAGCCTGCCTACTGCTATTTCCAAGATGAATAACTCCCT
TCTCCAACAATGTTTCTCCCTTGAAACCTGTGCAGACGATTATTTTGAAGCTTAAAGTTT
CCCACGACGTTTTAGCTTTTTACTGTCCTATAAGGTTTTTCATTTGGCGGGCATGTGTGA
GTGTGGTCGGGCTACAAGCCAACATATTATAATATTAAAACCTCAAACAAAGAGGCATTT
GAATAAAATGTGAGTCATTTTTATTTTCAACTGCTGCTTACGAAATTAACGCGTAATATA
ATAAAAAAGCTAAATAGTTAAGAGTAGAAAATAATTTAGATGTAAGCTGATATCAAAACA
CGCGGGCCAATGACGGTTGCGATTTTCGTAAATTAAAAAAAAATAGTAAGATTTTTCTGA
GGTTCTCGTTCGAGTTTTATGAGTTCATTTTCCTGAGATTATGAGTTCGATGGAAAAAAA
TATGTTTGAATTGAAAACGTACCAAACATCAGCACAATTTTAGTGTAAGTTTAGATGAAG
TAAAAATTAGATTTTTGGAAAATGTTTAATAGAAGATAGAGGAGTTAAGGCAACATTCAG
GATTGCGAGTGAGAAATAAAAATTTTAAAAACATTTTATATACAACTTCGTCTAGTCAAA
ACAAAACGACTATACTAAGACTTACTAGTCATTTTACGTTTATTTATTTTACTTATTTAT
TTAAAATCAATGCCAAATACAGAGAAGTAAATGACAAACATACTGTTATGAGAAAGAAGG
TTGTGTCTTAAATAATAAAAGAGATACATGAAAAAAATGAAAAAAAATCAATGAAAATAA
AATAATGGAAATTTAGTGAAAAATAGATTTATTTACTGTATAGGTAATTAATTATTAAGC
AAATGAAAAAAATATTTATTAATATTTGTAATTTTAAGGGCATTTAATCATTTACCGTAG
TTAAGGCGACGGATGATCTGTTTCCGTCGCTTCCGTAACTTTAAATGGAATCTCCAGCTG
TTCATGTTCGTGAATGTACGTTCATAATATATTAATTTCGTGCCTCGATCTGGAGCAAAC
TCCTTACAAATACCAAACTGAATGGGCTCACGGAAAAGTGATTTAGGATTCGAGATTGCG
CGTAAGGATAATGAGGAACATGGACCTCAACGATATTTGTAACGAAACGTAGGAGAGAAA
GTGTAGCGTCCGACGGATTTGGTGAATCAAAGTCAAAGAAACTATGTAAGATGGCTGACA
ATACGCACAAATAGTATGACAAATGTGTGTCAGCATTGGCTTCACTTTCGTTGTTCGAAA
CGCTACGCGGATCTTATTTAAAAATATAATGTGGTATATTGTAGAGGAAACTAGAATCAT
CTTTTTTGATATCTTTTTGACAGCGCACGTGTCTGTCCACGGCGCCTATTGATATAATAT
TTTGTAAAAGATGTATTTTATACATTATATTCAATGTTAACGGGCGTTTGAGTATTATTC
GCCATTATGTATCGTATTATATGTGCAGTCGTATCGATGTTTTTTATTTACAAAAAATAC
ATGGAATGCACGTGAGTCGGCTGTTCAGACGACCGCTAGCGTCGGCGTCTCGGCAACGAC
TGCCCATGAATTTGGCATGATTGACAAAATGACGAGTATACTGACACGCCCATATCTTTT
GACTGTCTTTTATTTTGTCCATTCTGCTTTGGTTTTGCGTAGATGAAACTCGATAAAACA
TATCGCTAGTTATTATTGATAAGATATTATATATGTATTAAAATATATTGGAAGTAATTG
TAACACATTTTTTCCGGTTTAAATATATGAATAATAATGTCAATTTGAATGATATGGTCA
ATCAATGAAAAATAGAAATCAAAGTATATTTTGT
(2974 bp)

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