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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17424c1_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nucleolysin_TIA-1_isoform_p40_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008143 F poly(A) binding
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0042036 P negative regulation of cytokine production
GO:0044822 F RNA binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0097165 C nuclear stress granule
GO:1903608 P protein localization to cytoplasmic stress granule
GO:1904037 P positive regulation of epithelial cell apoptotic process
Transcript
Level		FPKM:0.66 TPM:0.65
ORF EntryO_TrvaFAMAMG20466_complete:A_TrvaFAMAMG_TR17424c1_g1_i2
Sequence
(Nucleotide)
CTGGCTTTCACCAAGAACGGTTGTGCCTACGTTCTGTAGATAGAAAAAAAAATTAAACAA
AAAAAAACAACAAATTGAAATATACAAAAAGTATAAAAACAAAACAACCAAGAAGAATAT
GTGATAAAAACAAACTAAAACCGCTTAGAATAGTAAAATGGAAAATTAAAACATTAAAAT
GTTTTGATTTCGAAATACGCGTATCGTTGCAAAATGTTAACTATGTCTGCGCTGATGATG
CCTTCCGCTACCATGACCACGATGACCAATGCTGGACCCATACCAGTTGCCACGACCAAC
AAGCTGGAGCCAGCCAAGCTATTGCAGCTGCCCCACCCAGCTTTGATGCAGCAGATCCCT
CAGCAAACCCAACACCACCACCCATCCCAGCATCCTAGTAACAAACTGGAGCACTATCAC
ATTTTCGTCGGTGACTTGAGCCCGGAAATTGAAACCCAGAGCTTAAGAGATGCCTTCGCG
CCATTCGGAGAGATATCTGACTGCCGCGTCGTTCGAGATCCACAAACACTGAAATCAAAA
GGATATGGATTCGTCTCCTTTTTGAAAAAATCAGAGGCAGAGTCAGCCATCACATCTATG
AACGGGCAGTGGCTAGGATCCCGGTCTATTCGTACTAACTGGGCCACACGGAAACCACCG
GCGCCGAAAAATGAATTGAACTCGAAGCCTCTGACATTCGATGAGGTGTACAACCAAAGC
TCGGCAAGCAACTGCACGGTGTACTGCGGAGGTCTGACCACTGGTCTCACTGAAGAACTC
ATGCAGAAGACATTCCAGCCGTTCGGGACTATCCAGGAGATCAGAGTCTTCAAGGACAAG
GGATACGCTTTCATCAGATTCTCGACCAAGGAAAGCGCTACGCATGCCATAGTCGCCGTT
CATAACACTGACATCAACGGTCAGCCCGTGAAGTGCTCCTGGGGCAAGGAATCCGGCGAT
CCGAACAATTCGCAGGCTCAAGGACAATTGGGCGGGACTGCGTACAGTCCATTCGGGACC
GCGTACACCGCCGGCGGAGTGCCCCCTGCTTCGTACTGGTACAACACGTACCCGCAGCAG
ATCGGAGGGTTCCTTCAAGGAGTACAAGGAGTCCAGGGGTACACTTACGCTGGACAATTC
GGGTACCAGCAGCAATATATGGGGATGGGCGGTGTTCAGATCCCGTGGGCGCTGGGTGGC
GGTGTGGGTGGTGTGGGTGGCGTGGGTGGAGTGGCCGCCATGTCTCAACCGCCACAGGTG
CTTCACTACCCGGTGCAGCACTTTCAAGTGCAGCCCATCGGAGAGGATGAATGGCTCGCC
CCAAGCCTCCTCGTGTGAGGTCAACGACCAGCACCCACTGAGCCTGCCTACTGCTATTTC
CAAGATGAATAACTCCCTTCTCCAACAATGTTTCTCCCTTGAAACCTGTGCAGACGATTA
TTTTGAAGCTTAAAGTTTCCCACGACGTTTTAGCTTTTTACTGTCCTATAAGGTTTTTCA
TTTGGCGGGCATGTGTGAGTGTGGTCGGGCTACAAGCCAACATATTATAATATTAAAACC
TCAAACAAAGAGGCATTTGAATAAAATGTGAGTCATTTTTATTTTCAACTGCTGCTTACG
AAATTAACGCGTAATATAATAAAAAAAGCTAAATAGTTAAGAGTAGAAAATAATTTAGAT
GTAAGCTGATATCAAAACACGCGGGCCAATGACGGTTGCGATTTTCGTAAATTAAAAAAA
AATAGTAAGATTTTTCTGAGGTTCTCGTTCGAGTTTTATGAGTTCATTTTCCTGAGATTA
TGAGTTCGATGGAAAAAAATATGTTTGAATTGAAAACGTACCAAACATCAGCACAATTTT
AGTGTAAGTTTAGATGAAGTAAAAATTAGATTTTTGGAAAATGTTTAATAGAAGATAGAG
GAGTTAAGGCAACATTCAGGATTGCGAGTGAGAAATAAAAATTTTAAAAACATTTTATAT
ACAACTTCGTCTAGTCAAAACAAAACGACTATACTAAGACTTACTAGTCATTTTACGTTT
ATTTATTTTACTTATTTATTTAAAATCAATGCCAAATACAGAGAAGTAAATGACAAACAT
ACTGTTATGAGAAAGAAGGTTGTGTCTTAAATAATAAAAGAGATACATGAAAAAAATGAA
AAAAAATCAATGAAAATAAAATAATGGAAATTTAGTGAAAAATAGATTTATTTACTGTAT
AGGTAATTAATTATTAAGCAAATGAAAAAAATATTTATTAATATTTGTAATTTTAAGGGC
ATTTAATCATTTACCGTAGTTAAGGCGACGGATGATCTGTTTCCGTCGCTTCCGTAACTT
TAAATGGAATCTCCAGCTGTTCATGTTCGTGAATGTACGTTCATAATATATTAATTTCGT
GCCTCGATCTGGAGCAAACTCCTTACAAATACCAAACTGAATGGGCTCACGGAAAAGTGA
TTTAGGATTCGAGATTGCGCGTAAGGATAATGAGGAACATGGACCTCAACGATATTTGTA
ACGAAACGTAGGAGAGAAAGTGTAGCGTCCGACGGATTTGGTGAATCAAAGTCAAAGAAA
CTATGTAAGATGGCTGACAATACGCACAAATAGTATGACAAATGTGTGTCAGCATTGGCT
TCACTTTCGTTGTTCGAAACGCTACGCGGATCTTATTTAAAAATATAATGTGGTATATTG
TAGAGGAAACTAGAATCATCTTTTTTGATATCTTTTTGACAGCGCACGTGTCTGTCCACG
GCGCCTATTGATATAATATTTTGTAAAAGATGTATTTTATACATTATATTCAATGTTAAC
GGGCGTTTGAGTATTATTCGCCATTATGTATCGTATTATATGTGCAGTCGTATCGATGTT
TTTTATTTACAAAAAATACATGGAATGCACGTGAGTCGGCTGTTCAGACGACCGCTAGCG
TCGGCGTCTCGGCAACGACTGCCCATGAATTTGGCATGATTGACAAAATGACGAGTATAC
TGACACGCCCATATCTTTTGACTGTCTTTTATTTTGTCCATTCTGCTTTGGTTTTGCGTA
GATGAAACTCGATAAAACATATCGCTAGTTATTATTGATAAGATATTATATATGTATTAA
AATATATTGGAAGTAATTGTAACACATTTTTTCCGGTTTAAATATATGAATAATAATGTC
AATTTGAATGATATGGTCAATCAATGAAAAATAGAAATCAAAGTATATTTTGT
(3233 bp)

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