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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17424c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nucleolysin_TIA-1_isoform_p40_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008143 F poly(A) binding
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0042036 P negative regulation of cytokine production
GO:0044822 F RNA binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0097165 C nuclear stress granule
GO:1903608 P protein localization to cytoplasmic stress granule
GO:1904037 P positive regulation of epithelial cell apoptotic process
Transcript
Level		FPKM:0.48 TPM:0.47
ORF EntryO_TrvaFAMAMG20464_complete:A_TrvaFAMAMG_TR17424c1_g1_i1
Sequence
(Nucleotide)
CTGGCTTTCACCAAGAACGGTTGTGCCTACGTTCTGTAGATAGAAAAAAAAATTAAACAA
AAAAAAACAACAAATTGAAATATACAAAAAGTATAAAAACAAAACAACCAAGAAGAATAT
GTGATAAAAACAAACTAAAACCGCTTAGAATAGTAAAATGGAAAATTAAAACATTAAAAT
GTTTTGATTTCGAAATACGCGTATCGTTGCAAAATGTTAACTATGTCTGCGCTGATGATG
CCTTCCGCTACCATGACCACGATGACCAATGCTGGACCCATACCAGTTGCCACGACCAAC
AAGCTGGAGCCAGCCAAGCTATTGCAGCTGCCCCACCCAGCTTTGATGCAGCAGATCCCT
CAGCAAACCCAACACCACCACCCATCCCAGCATCCTAGTAACAAACTGGAGCACTATCAC
ATTTTCGTCGGTGACTTGAGCCCGGAAATTGAAACCCAGAGCTTAAGAGATGCCTTCGCG
CCATTCGGAGAGATATCTGACTGCCGCGTCGTTCGAGATCCACAAACACTGAAATCAAAA
GGATATGGATTCGTCTCCTTTTTGAAAAAATCAGAGGCAGAGTCAGCCATCACATCTATG
AACGGGCAGTGGCTAGGATCCCGGTCTATTCGTACTAACTGGGCCACACGGAAACCACCG
GCGCCGAAAAATGAATTAGGTCCCGGCTTGGGCGTTCCCCTTGCCTTGCCGATGACGATG
TGCGGCGGTGACCACTTTACATCAGGTGGACTGCATACTCGTCTGCCTTCGATGGCTATG
AAGAGAGTGAACTCGAAGCCTCTGACATTCGATGAGGTGTACAACCAAAGCTCGGCAAGC
AACTGCACGGTGTACTGCGGAGGTCTGACCACTGGTCTCACTGAAGAACTCATGCAGAAG
ACATTCCAGCCGTTCGGGACTATCCAGGAGATCAGAGTCTTCAAGGACAAGGGATACGCT
TTCATCAGATTCTCGACCAAGGAAAGCGCTACGCATGCCATAGTCGCCGTTCATAACACT
GACATCAACGGTCAGCCCGTGAAGTGCTCCTGGGGCAAGGAATCCGGCGATCCGAACAAT
TCGCAGGCTCAAGGACAATTGGGCGGGACTGCGTACAGTCCATTCGGGACCGCGTACACC
GCCGGCGGAGTGCCCCCTGCTTCGTACTGGTACAACACGTACCCGCAGCAGATCGGAGGG
TTCCTTCAAGGAGTACAAGGAGTCCAGGGGTACACTTACGCTGGACAATTCGGGTACCAG
CAGCAATATATGGGGATGGGCGGTGTTCAGATCCCGTGGGCGCTGGGTGGCGGTGTGGGT
GGTGTGGGTGGCGTGGGTGGAGTGGCCGCCATGTCTCAACCGCCACAGGTGCTTCACTAC
CCGGTGCAGCACTTTCAAGTGCAGCCCATCGGAGAGGATGAATGGCTCGCCCCAAGCCTC
CTCGTGTGAGGTCAACGACCAGCACCCACTGAGCCTGCCTACTGCTATTTCCAAGATGAA
TAACTCCCTTCTCCAACAATGTTTCTCCCTTGAAACCTGTGCAGACGATTATTTTGAAGC
TTAAAGTTTCCCACGACGTTTTAGCTTTTTACTGTCCTATAAGGTTTTTCATTTGGCGGG
CATGTGTGAGTGTGGTCGGGCTACAAGCCAACATATTATAATATTAAAACCTCAAACAAA
GAGGCATTTGAATAAAATGTGAGTCATTTTTATTTTCAACTGCTGCTTACGAAATTAACG
CGTAATATAATAAAAAAGCTAAATAGTTAAGAGTAGAAAATAATTTAGATGTAAGCTGAT
ATCAAAACACGCGGGCCAATGACGGTTGCGATTTTCGTAAATTAAAAAAAAATAGTAAGA
TTTTTCTGAGGTTCTCGTTCGAGTTTTATGAGTTCATTTTCCTGAGATTATGAGTTCGAT
GGAAAAAAATATGTTTGAATTGAAAACGTACCAAACATCAGCACAATTTTAGTGTAAGTT
TAGATGAAGTAAAAATTAGATTTTTGGAAAATGTTTAATAGAAGATAGAGGAGTTAAGGC
AACATTCAGGATTGCGAGTGAGAAATAAAAATTTTAAAAACATTTTATATACAACTTCGT
CTAGTCAAAACAAAACGACTATACTAAGACTTACTAGTCATTTTACGTTTATTTATTTTA
CTTATTTATTTAAAATCAATGCCAAATACAGAGAAGTAAATGACAAACATACTGTTATGA
GAAAGAAGGTTGTGTCTTAAATAATAAAAGAGATACATGAAAAAAATGAAAAAAAATCAA
TGAAAATAAAATAATGGAAATTTAGTGAAAAATAGATTTATTTACTGTATAGGTAATTAA
TTATTAAGCAAATGAAAAAAATATTTATTAATATTTGTAATTTTAAGGGCATTTAATCAT
TTACCGTAGTTAAGGCGACGGATGATCTGTTTCCGTCGCTTCCGTAACTTTAAATGGAAT
CTCCAGCTGTTCATGTTCGTGAATGTACGTTCATAATATATTAATTTCGTGCCTCGATCT
GGAGCAAACTCCTTACAAATACCAAACTGAATGGGCTCACGGAAAAGTGATTTAGGATTC
GAGATTGCGCGTAAGGATAATGAGGAACATGGACCTCAACGATATTTGTAACGAAACGTA
GGAGAGAAAGTGTAGCGTCCGACGGATTTGGTGAATCAAAGTCAAAGAAACTATGTAAGA
TGGCTGACAATACGCACAAATAGTATGACAAATGTGTGTCAGCATTGGCTTCACTTTCGT
TGTTCGAAACGCTACGCGGATCTTATTTAAAAATATAATGTGGTATATTGTAGAGGAAAC
TAGAATCATCTTTTTTGATATCTTTTTGACAGCGCACGTGTCTGTCCACGGCGCCTATTG
ATATAATATTTTGTAAAAGATGTATTTTATACATTATATTCAATGTTAACGGGCGTTTGA
GTATTATTCGCCATTATGTATCGTATTATATGTGCAGTCGTATCGATGTTTTTTATTTAC
AAAAAATACATGGAATGCACGTGAGTCGGCTGTTCAGACGACCGCTAGCGTCGGCGTCTC
GGCAACGACTGCCCATGAATTTGGCATGATTGACAAAATGACGAGTATACTGACACGCCC
ATATCTTTTGACTGTCTTTTATTTTGTCCATTCTGCTTTGGTTTTGCGTAGATGAAACTC
GATAAAACATATCGCTAGTTATTATTGATAAGATATTATATATGTATTAAAATATATTGG
AAGTAATTGTAACACATTTTTTCCGGTTTAAATATATGAATAATAATGTCAATTTGAATG
ATATGGTCAATCAATGAAAAATAGAAATCAAAGTATATTTTGT
(3343 bp)

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