SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17407c0_g1_i8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106717236_isoform_X2_[Papilio_machaon]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0030837 P negative regulation of actin filament polymerization
GO:0045214 P sarcomere organization
GO:0051639 P actin filament network formation
GO:0055003 P cardiac myofibril assembly
Transcript
Level		FPKM:1.15 TPM:1.12
ORF EntryO_TrvaFAMAMG20280_5prime_partial:A_TrvaFAMAMG_TR17407c0_g1_i8
Sequence
(Nucleotide)
ACACGAACCGTTTCATCATTTGAACAGTAACGATGTATTACGACAAGTTTCTATAGACTC
GGGAATAGCGGAGTATGACGAGGAATACACCGACCCCATCATGGATCTCGAAGAATCATC
CGACGAAGACGATTTCCAAGATGCTCTTGAAACTTTTGACGATCGTAAAAATTCACTTGT
TCTTCGGACGCAGCTGTCGGTTCGAGTTCACGCCATCTTGGAACGGTTACTACACTCTCA
AGGTCGAGAGCTGCGTCGGGCATTATTCTCTCTCAAGCAAATCCTGCAATCGGACAAGGA
TCTTGTCCACGAGTTCGTCGCAAACAAGGGACTTGACTGCCTCATGCAAGTCGGCAACAT
GGCTGATCATAACTATCTGGATTATATACTTCGAGCTCTTGGCCAGATTCTCCTGTACGT
CGACGGAATGCACGGAGTGATGGCTCACAAAGGATGCATCCAATGGCTCTACTCATTGAT
CTCAAGCAAATTTAGACATGTCGTCAAAACTACTCTCAAACTGCTCCTTGTATTCGTAGA
GTATACTGAAAAAAATAGTCTCCTTCTAATTGAAGCCATTGTAGCAGTAGATGGCTCCAA
CGGTCGTCAGCCTTGGCATAACGTTATGAAGATTTTACAAGACTTCGACGCTTCGGATAC
GGAGCTGCTTATTTACGCGACTACGTTAATCAACAGATGCTTAAACAATGTTCCGGACAG
AGACACGTACTATGATCAAGTGGATGCCTTGCAGGATCAAGGCATGGACGATATCATACA
ATTGTACATGACGAAGCAAGGAACAGATTTAGATCTTTTAAGACAACTACAGATCTTTGA
AGCAGTTTTACTATATGAAGACGGCGATGAAAGTGGAACGGCGTTAAAACAACTTGATGA
ATCTGTGATAGCATCGGTGCGGAGGCGAAGTCTTAACGTCAATTCATCCGAAAGACGAAA
ATCAAAAAAACAACAAATAAGAGAAAAAGGAAACCAAAGATATACGGCAGGGCTAAAACA
AAGAATTCAAAATGGCACTCTCGGTCATAGCGTCAACGCAGTAGACGCTCTGGCAGCAAT
ACGTCAGATTGATAGCACTCCTGAAACCAAAAATGATCGAGGCATAATTATCAATAGAGA
ACACAGCATTAAGGACTTAGCTCAACGCCTCACAAGTCCAGTGAGTCCCACGACTGAAGA
GAAACCTTTAAGAGTTTCAGAAATGGCTGGGATTGTGTCTAAAGCCAAAGAAGAACTAGC
AAAATCTCAATCTAAAGAAGTCATCAAAAGTCCAACAATAGAAATTTCGCCGAAGGTACA
TGAGATCAAAGTATCAGAAAACGATCTTCACTGGGAAGAACTGAAAAAAGGATGTCTCAA
TAGAGAATTCCATCTTTGTGATTTAGATTTTTCCGATTTAAGACACGACTCTGAAGATGA
TATGCTGTACCCAACTGTGAATGCTGCTAATGGACCTCCTCCTCCACCTCCTGGAATGTT
TCCACCCATAGGAGCTCCACCTCCCCTTCCAGGTGGTTTCACAATTCCTAAAAATAATGT
TCCGCTACCACCTAAATCATCTTTATCATCGGAACATTCAAACAATTCAGACAGTTTAAC
AATTAAAAAAAACAAAAAAACTGTGAAACTATTTTGGAAGGAAATACAAGAGAATCCTGT
GCCTGTAACGGTCAGACCTAAAGTAGGCGGTTTTATCTGGGATGATTTACCAAATATAGA
TCTGGACACTGCAATGTTAGAACATCTTTTCGAATCAAGAACGAATGATTTGATAATTAA
GGAAAAATTAATGGAACCAAAGAGAAACCTAATTTTAGACACGAAAAGGTCCAATGCAAT
AAACATTGCCATGAAAAAACTTCCTACACCACAAACTATTAAAGCAGCTATCATGAAAAT
GGACGCAACAGTAATAGGTAGAGAAGGTATTGAGAAACTTCTTACGATGTTACCTACAGA
AGAAGAGAAAGTGAAAATACAAGAAGCTCAGTACGCTAACCCGGACTTACCACTTGGAAG
CGCAGAACAATTTCTGCTCACCTTAGCATCTATCAATGAATTGTCATCCCGACTGAAACT
TTGGGTCTTCAAACTGGACTTTGATAACTTAGAGAAAGAGATAGCAGAACCATTAATGGA
TTTAAAACAAGGTATAGAACTATTAAAGTCAAATAAAACGTTTAAAATAATACTATCGAC
GCTGAGGTCGGTTGGTAACTTCCTAAACGGAAGTTACGTGAAAGGGTTCCGGCTGGAGTA
TCTGTCCAAAGTCATGGAGGTCAAAGACACCGTCCACAAACACCCGCTGCTCTATCATAT
ATGCGAGATGATCATAGAGAAGTTCCCGGATAGCACCGACTTCTTTAGTGAAGTTGGTCC
AGTTATCCGTGCATCCAAAGTAGACTTCGATATACTCAGCACGAACCTTCAGAAACTAGA
GTCTGACTGTAAGGCGTCCTGGGACCACATGAAGAGGGTCGCCAAACACGACAGTTCACA
GATTTTCAAGACTAAGATCAACGAGTTCCTCACAGACGCTGCTGAGAGGATCATATTGCT
CTCTGTGATCAAAAAGAGAGTTATGAGCAGATTTGGTAAATTATTGTTGAGGTTTGGCGT
GCCACCGTCAGATATCGCGAAAACGAAACCTTCTGAGTTCCTTAAGGTCATAGCTGAATT
CGCTTTAGAATATCGCACTACCAGAGAAAGAGTACAACAGCAGATGGAAAAGAGAGCTAA
TCACAGAGAAAGGAATAAAACCAGAGGCAAAATGATTATTGATGTCGGAAACTATTCCAA
TAAGAACGGTGATCACACAGCCGATCACGCTTTAAAAGAACTTCTAAAAACCGACCCTGA
CACGGACAGTTTGACAGACATAACACAAGGTAGACGCAAATCTCAAGCCTCCACCAACAG
AATGCTAGTCAATGGCGATCTCTCAGCGGACGATGAAATAATCGAGAGTTTGGTACGATC
CGCCACGTCGAAACGACGAACAGCACCCCGAGAACGTAGAAGAAACCGGATGTCTGACAA
AAAGAATTGGAACAGAACGTTGGATGGACATCAATCTTGGCCTAGAAGAGAAAGTAGTCC
AGGATCCACAACGGAGATACAACATAGGTAGTCAACAAGATAAGAATAACCTACTTGTAA
ATTATTATTTATTATTGAAACAAACAGAGACGTATTCGTGAATTTTAAGTTACGTTCATT
ACTTCGTACCTACTGTACAATTTGATATTATACAGCAAGTATTTTGTTTTAAGAGTATAT
TGTTAACACACTGTTAAAATTTTTACTTTTTCTATACCTAAATATTTTAATAGGTACTTT
ATCATTAAATATTGGGTTATAACTACACTTCTCGCCTAGGTATAATATTTACATACTGTA
GTTCAATAAAACTAATGTTTTTTAAACGTACCTACGCCTACGTCAAATTACCTATTTTAC
TTCAAATATTTCTTTCAATGTCTTTTTGAATTTTAGTCTCGCTCTTTCCTATAACTTTTT
GAACCTAATCTAAAAAACTACTGAGTACGTCTAATGTTAAAAGGAATCTCATCCCCCAGG
CTGGCTCCTAAATAATTTTTAATTAAAGTTACTACGAATTTTATATACGAATTTTTTTAG
AAACGGTATCAAAATTTTTAATAATTGTTTAATATCGACATTTTTAAAAGTGTGACGAAT
AATATTTTAATACCTAGTATTCTATAACAAATTAATTTAGTTTTCCAAAGAAAAATGAAA
TTTTAAATTAATGACATTATTTACGATTATTTTAACTATTACAATTACAATTATTAATAA
ACTGTGTTTAATTTAAGTCTCGAATATGTATGGGCAAACACAATACCTATGTTATATATG
GGTAAAACCACAAATTCGCCATGAGATTTTGTATCGTTCGTTTAAAATATGTTTTGTTTT
TTAATGTAAATTGAAAATAAATTCCTGTTAGTCATTAATACTACACATAATAGTTATACA
ATCGAGGCAATTGAGCACTTCTTTATACAAAATTAATCTTAAAAAAGTAAAAATATAATT
AAGAATAAAATCA
(4093 bp)

- SilkBase 1999-2023 -