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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17402c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX52_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:0.92 TPM:0.90
ORF EntryO_TrvaFAMAMG20245_complete:A_TrvaFAMAMG_TR17402c0_g1_i3
Sequence
(Nucleotide)
TTTGATCTATGTTTAAAGACTGTATATTTTTGACAAACAAGATTTGTTGTCAATATTTGT
GTACATTTCTGTTCTGGAGAAATGGGTTTCGATATTATTTTGTTTTGATAGCAATTTGTT
AAATATCATTTCATTGTGACCGATTCTCAGGAAGACATTATGTTTTATTCTTCTTCTTTT
ATCTTGCAAGAAACTACCTTACCATACAACTTTCTCAACATATTTTCAAATACTCAGGAT
CGACAAATAGTAGCCTGCGCGCCCACAGGGTCGGGTAAAACGGCCGCGTTCATCGTGCCT
CTCTTACACACACTAGGGGCTCCCCAAGGCGGCCCTAGAGCCCTAGTGCTCTGCCCCACC
AGGGAATTAGCGCACCAAATATACAGAGAAGCGTTACGACTGAGCGCTTCTACTCAATTG
AGAGTCAGCGTTGTTAAGAATTTGAAGGAAAGTAAAGTTAAGGAAAGAGAGGCTACGTTT
AGGAAGAGTGACATAGTGATAAGTACTCCAAATCGTCTCTGCTACTTACTTAATCAAGAT
CACGTCAATATTTCTTTAGAAAAAGTACGTTGGCTCATCATAGACGAGGTTGATAAACTA
TTCGAAGGTTCCTCCGACCAGGAGTCAGACTTCAGGCAACAACTCGAACAGATCATGTCT
CGTTGCGGCCCCAAGCGACAGGTCGCCATGTTCAGCGCCACACACACGCCACACGTCGCT
AAATGGAGCCGACATAATATGAGGGGACTTATTAATATTACTGTAGGACAGAGAAACGCA
GCGACCAGTCTCGTTGAACAGGAATTATTATATTGCGGCAACGAAAACGGAAAACTCGTA
GCGTTCAGACAACTTGTACAACAAGGACTAAAACCCCCTGTACTTGTGTTTGTTCAAAGT
AAAGATCGCGCGAAGCAGTTATTTAAAGAACTCATATACGATGGTATCAATGTGGACGTC
ATACACGCGGACAGAACACAAGCGCAGCGAGACAACGTGGTCCGCAGTTTCCGCGTGGGT
CGTATCTGGGTGCTCATCTGCACGGAGCTCATGGGGCGCGGGATCGACTTCCGCGGGGTC
AACCTCGTCGTCAACTACGACTTCCCGCCGTCTGCCATCGCTTATATACACAGAATAGGC
CGAGCTGGTCGCGCCGGACAGAAGGGTAAAGCTGTTACATTCTTCACGCAAGATGATGTC
GTCAATTTGAGGAGTATAGCATCAGTTATGAAGCAATCCGGTTGTGAAGTTCCCGAGTAC
ATGTTGAAACTAAAACAGGATTCTAACAAAAGGAAACAGCTAGTCAAAAAAGCTCCTCAT
AGAGACAAAATATCTACTATATTGGAGAAACCGGCCAAAAGAAAACTAGAAGAACAGTCA
AAAGATTCTAAAGAAACAAAAGATACGGAAAAGATAAAGAATGCAAAACACAAGAAACAA
AGACGAATGAATGGAATAAAAGAAAATGGCGTCAGAAAAACAACTGAGAAAGGAAATAAA
AAGAAAAACTTGAAAAAGAAGAAAAATATTAAATTTAATAAAAAACCTAAAGTTGTTACT
TAAATAAATACATTCAATTTTGTAAAAAAA
(1590 bp)

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