SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17402c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX52_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.83 TPM:3.75
ORF EntryO_TrvaFAMAMG20244_complete:A_TrvaFAMAMG_TR17402c0_g1_i2
Sequence
(Nucleotide)
GAAATTGGAAGGTGCAGAAGTTATTTGTAAAAGAACACGTTTTTTAAAAATTAACTTGAA
TAAAACTATTTAATGTTACTAAAATGGATGCATACGATATATTTAAGAAATTAACCAAAG
GTTTAACGTTCAAGAATAAAGTTCTGGGCGTAAAAAACAATCAGACCGCAAAAGATAAAA
ATCAAAACATAAAAGAAGAAACACAAATAAAAGAAGAAGAAAACCTAAGTGATATTGAAT
TAGAAACGGAGAATGTTGTTTCCGAAGACTCGCAACCAGGTTCTGGCTCTGATGATGAAC
TTGAATTAGTGGAAGGAGTCAAAGTTGGCAAAAAGAGAGAAAAGAAGAAAAAAGAGAAAA
CTGAAGATTTAAAAAAGAAACTTGAGCAGGAAGAGCAAAATCGTTTCCGCAACGAGCATG
GCATTAAAGCAGTCGGTCGTCACATTCCAAATGCACTGCAATCGTTCTCAGACCTGGTGT
CTCGGTACAACGTGACTCCAGGGCTTGTGGACGTGGTCACACAGTGCGGGTATACGGAAC
CTACTCCGGTACAGAGGCAGGCACTACCTTGTATGATGGAGGATCGACAAATAGTAGCCT
GCGCGCCCACAGGGTCGGGTAAAACGGCCGCGTTCATCGTGCCTCTCTTACACACACTAG
GGGCTCCCCAAGGCGGCCCTAGAGCCCTAGTGCTCTGCCCCACCAGGGAATTAGCGCACC
AAATATACAGAGAAGCGTTACGACTGAGCGCTTCTACTCAATTGAGAGTCAGCGTTGTTA
AGAATTTGAAGGAAAGTAAAGTTAAGGAAAGAGAGGCTACGTTTAGGAAGAGTGACATAG
TGATAAGTACTCCAAATCGTCTCTGCTACTTACTTAATCAAGATCACGTCAATATTTCTT
TAGAAAAAGTACGTTGGCTCATCATAGACGAGGTTGATAAACTATTCGAAGGTTCCTCCG
ACCAGGAGTCAGACTTCAGGCAACAACTCGAACAGATCATGTCTCGTTGCGGCCCCAAGC
GACAGGTCGCCATGTTCAGCGCCACACACACGCCACACGTCGCTAAATGGAGCCGACATA
ATATGAGGGGACTTATTAATATTACTGTAGGACAGAGAAACGCAGCGACCAGTCTCGTTG
AACAGGAATTATTATATTGCGGCAACGAAAACGGAAAACTCGTAGCGTTCAGACAACTTG
TACAACAAGGACTAAAACCCCCTGTACTTGTGTTTGTTCAAAGTAAAGATCGCGCGAAGC
AGTTATTTAAAGAACTCATATACGATGGTATCAATGTGGACGTCATACACGCGGACAGAA
CACAAGCGCAGCGAGACAACGTGGTCCGCAGTTTCCGCGTGGGTCGTATCTGGGTGCTCA
TCTGCACGGAGCTCATGGGGCGCGGGATCGACTTCCGCGGGGTCAACCTCGTCGTCAACT
ACGACTTCCCGCCGTCTGCCATCGCTTATATACACAGAATAGGCCGAGCTGGTCGCGCCG
GACAGAAGGGTAAAGCTGTTACATTCTTCACGCAAGATGATGTCGTCAATTTGAGGAGTA
TAGCATCAGTTATGAAGCAATCCGGTTGTGAAGTTCCCGAGTACATGTTGAAACTAAAAC
AGGATTCTAACAAAAGGAAACAGCTAGTCAAAAAAGCTCCTCATAGAGACAAAATATCTA
CTATATTGGAGAAACCGGCCAAAAGAAAACTAGAAGAACAGTCAAAAGATTCTAAAGAAA
CAAAAGATACGGAAAAGATAAAGAATGCAAAACACAAGAAACAAAGACGAATGAATGGAA
TAAAAGAAAATGGCGTCAGAAAAACAACTGAGAAAGGAAATAAAAAGAAAAACTTGAAAA
AGAAGAAAAATATTAAATTTAATAAAAAACCTAAAGTTGTTACTTAAATAAATACATTCA
ATTTTGTAAAAAAA
(1934 bp)

- SilkBase 1999-2023 -