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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17401c1_g3_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13-like_[Plutella_xylostella]
Ontology
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
Transcript
Level		FPKM:7.15 TPM:7.00
ORF EntryO_TrvaFAMAMG20233_3prime_partial:A_TrvaFAMAMG_TR17401c1_g3_i2
Sequence
(Nucleotide)
GACGAAATTAGTTTTCGCTATCTGCCGCAACAGCAGCACTGTCGGCTTGGGTTGTTGTTT
CCTCTCCGCCATTTTCCAGTCGCCATTGAGAGGTGAAAACTACGCTAAATGTCGGTGATG
ATTTTAAGATTTTGAGTGGTTTCTTTAAGATTATACCTGTTTTTAGTGTTGTGAAATGAA
AATGAAGTGCCCCGGACTACCATGACGCATCAAAATCACCAAACAAACGGTGCAAGTCTC
GAGGATTGCCACACAAACTTCTTCGCCTTGACGGAGCTTTTCGGCATAAAATGGCGTAAG
CTTGTGTGGGGCGAGACGAGCGTCGTCGAGGGCGAGGACGGCGCGCCTCTCGCTGATCCC
GTGATCAGCAGCTACGCGCGCTGCCTCGCCGGCGACATCCTGTGCGTGTGGCGGCGCGTG
CCGGCCCCGCAGCCGCCGCCCGACATCTACGACATGGCGCCCGCCCCGCCGCCGCAGCCG
CCGCCGCTCTCGCTCAGAGCCGCCAAGGAGCTATGGATCTTCTGGTACGGCGAGGAGCCG
GATCTCAACGGACTCGTCGCGCCAGAACTCATATCCGGACAAAGCGAACACGGCTCCTGG
GAGAGTGGATTGTCGTACGAATGCCGATCCTTGCTGTTCAAGGCCTTGCATAACTTGATA
GAAAGATGTCTGCTTTCGCGGGATTTTGTAAGGCTCGGCAAGTGGTTCGTCCAACCTTAC
GATGGCGACGAAGAAGACGTTGGGAAAAGTCCGTGGCACCTGTCGTTTTCGTTCGCGTTC
TTCCTGCACGGCGAGAGCACGGTGTGCGCGTCCGTGGACGTGCGACAACACCCGCCTGTG
CGCACGCTCACCGCTAAACGACTCGCCAAACTCAACTCGCCCGATAACCAGCCTGATGCT
AAAGTGATCTTGGCGCCGTTCGGTCTGGAAGGCACGTTGACGGGGCGGCAGTGGAGCGAC
AGCGACGCGGCAACGGCGCGGCTTCTTGACGCGTGGAGGCAACTCTACCCGCTCGAACAA
GGATGCGGGGCTGTCGAGGTGGTGTGCGGCGGTGCTCGCATGCGGTACCCGGTGCCGTAC
GCACTGATGACGGAGGTGGAGCGGCCCCCGCCCGACGTGCCGCGCCCCGCCGCCGCGCCG
CGCGCGCACCGAGCCCTCACCGCGCCCGCGCCGCATCAGACCCTTGAAATTTGTTACGCG
GATCCATCGGGCGATAAAAACGATGATTTTATGGATCCAACTCGTAAAACTCCATGTACC
TGCACCAAGTGGCGCCGCCGCAGGACGCCGCGCCCTCCGCCCTTCCATCGACGGACGCGA
ACACACACACTCGCGCACCAATCAGCGTGCGGGTCGGGGTCGCCGGGCTCGTGCAGCGGG
TCGCCGCCCGCCGCGCCGCCCTCCGCCTCGCCGCACCACACCGTGCTGCCCACGCACCAG
ACGTCAGGTCTAGTGCCGACGACGCTGCACACGCCGGCCCCCACCCCCGACCCCCTGGCG
CCGCCCACCCCCGCGCCCTCCTGTCTACCACCCTCCAAGTTATACAACCAGAGTGATTCC
CCAAGTTGTCCGGAGCTCCAGCGCCGGCCCGTACTGCCGGTCGCGGAGAGGAGACTCGAC
CCGCTCGAAGACGAACACTCGTTGCATATGTTATACGATTATACCACCGTTTATGCTTGG
TTGGAACACCCCGTGAAACGCTTCAAGAGCGAAGAGGGACGGTTTAGAGAGGAATTAGCG
CTCGGCACCGCTCAGACTTCAGATCTGTATGCGGGACATCAACACATCACTCCGGACCTA
CTACCGAATATCAAGCAGGAGAGACAGAACACTGAGGATATTAAAGATTACAAGAACTTG
TTCACGTCGGACGGTTTGTGTCCAACGTACAAAGACTTGGATCAAATATTCGACAATTCA
GACGACGCGGCCAGCGGCGATGAGACGATGTCGACGTCGCTGGACAAGTGCGAGGAGGAG
CGGGCGCGGTGCGCGGGGCGGTGCGTGCGCGCGGAGGAGCTCAGCAAGATGTTCCCGACG
CCGCCCTCCATGGAGGCGCACGCGCAGCCCTCGCCCGGTTTCAGCCTGCCCGACGACCCG
CCGCCCGCCATCGACCCGCCGCCGGACTGCGCTATAGAGGACTGGTCGTTCGTGTTCAAG
CCCCCGACGATGTACAAGTACGTGGGTTCGTGCAAGTACGCGCCGCTCACGACGCTGCCC
AGTCAGCTGCTGCCGCCCGTGTCCCTGCCGCCGCACGCCGTGTACCGGCCGCGGCCCCGC
CCCGAGCCCGAGCCCGACGCCGCGCCGCACGACCCGGACACTGCCGCCG
(2329 bp)

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