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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17396c0_g1_i7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_MYCBP2_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:0.13 TPM:0.13
ORF EntryO_TrvaFAMAMG20207_5prime_partial:A_TrvaFAMAMG_TR17396c0_g1_i7
Sequence
(Nucleotide)
TATTCATGAAGAATCGATTTTATTTTGGAAATCTTTTACTAAATTTCCTCAAGTTAAAGG
TTAAAGAATTTAAATACAAAGTATAAATTTTTCCAAAACAAAATCAAGTAACTGTATTAA
TTTTAGTACTTACTGGTAGAGTGATTGTCCTTCGAATATTTGATGTATCGTCGGGAGGGA
AGTGAGGTCCAGTCCTCTGGATAGGAAGAGCGCTTCGCACGCATCGTGGGACATCTCGTC
TTCGACGCCCGGATGATTGTTCCTCATCATTGCGTGGAGTTGTACCTCCACTAATGTAGC
TGAGCTCATGGGAGGTATCTCCAGATCAGGTGATAGTAGTTTGGAAGCGCACGACGCTCC
GGCGTATATGAGATCCATCTCCAAAGACAACAGACCTTGCTTTATTGACGGCAAAGAGTC
TTCATAGCCGACTGCCAGACAACGGAAACCGAAGCGGCTCTCTTCATTGTTGGCTTTGTT
GTACTCGGTGAGATAATCCGAAGCCGTTTCCAATGAAAATATTACTTCATTGCCAGGTAC
CAGCAAAGCTCTTTGTGGCCATTCGGCCGCTACGTTGGCGAGCTTTGGTGTAACGCTGAT
GTAAGTGCAATTGTACTGCATGCACGTAGATTCAGCGTCAACGATTTCGTCCACATAATC
GTCTAACTCGGTGTCCGAAGTCAACCGTACCAGTTTCTTCTTGAAAGGTGCTACAGCGTT
TTGTTCGTCACTGCAATGACATTTATGTTTGGGCGCTCCGGCCACTGCGTACACGGTCAG
GGAGTCTTCAGGCTGAGCTGTGACGCTTCTCGGGTCCATCTCTAGGACGATCCAGGATAC
TGACACCGGGAACAGGACCCTCATATTAGAGACAGTAGCTGGTTTATATGGGTGTTCGCT
CTCAACCCAGCTGTAGTACTGAGCTGCTCCGCCGGCTAAGTTAGCTGTAGGCATCGCCAG
ATTGATAGCAGCGATGTGAGGCAAAAGCTTGCGAACCATTTCTAGCAGCTTGATCACGCA
CTTCGGTTCATCAATAGCATCAATGCTGGCCAACATATGAGGTACGAGCATGTTGATAGC
AGGAGACTGTTCGAACACGGAAACATTCCTTCTCAGGTCATCGAGCGAGATCTCGTTGCG
CAATGTGCAGAACAGTTCTATTATATTCTCCAGTACAAGGCACACGACTCGCATTGTGAT
AGTACGGAGACCTAGCTCCGTGGAGTCCGTACTCTCTGATGTAGAAGGAGCAGGGGATCG
CGAGTAGTAAATGAGGCTAGGTATTTGTCCCCTAGCGAGAGTGGTTCCGTTGAAACTGAG
CGAGCAGGATGCAAAACGGAACGTGGTACCGTCAGGACCGTTCACTGAGGGCAGACCACA
GTCACCGTTCGCTGTTCGACCGCCGTGGTTACACAGCCTTATAGCGTAGCGGACGTCCTC
CTTAAGCGGTATAGAACGGTCAAACTTCAGTTGAACCATTTCGTGTTGACAATCAACCGC
GCTGAAAGCACCGTGGGCGACTTCAACGCTGACCCAACAATGGGCTGGGTTCATCTCTTC
AGGCGAAGAACGTGATTGCCTAACATCATTAAGCAGCTCAATCGAGTACTCGTAGTTTCC
GGTACCGCCGTAAACGCAGACTCCTAGTAACATCACCCCGGGTCGGTCGACGGTGAAGCA
GATGGCGTCGGGGCTTCCGTTTCCGGTGTTCCATGCGCGAGACTGGTTGACTCGCATGAA
ACGGGACGGGGTTACCAGTTGCCTGACGGCTGAGCAGTCCACCTCATCCCTGATATGGTT
AGCGCTGTGTGTAAGTTCAGAGACCGCTCTAACAATGAACTTGCAACAGAACTCCGCCTG
TCGCTCGTTGTGTCTGATCTCGCCGTGATCGTGCGGCGCGTTGCAAGGGAAACTGGTAAC
GTTGCGTTTTATAGGGAGCAACACCATGTCAAGTAGTTTTTGAAGCAGATCCAACAGATG
CCACTCGGTGAAATGACGCTTAATTTCCGGTAAATCCGGACGTCTCATTTCATTCAACAA
ATACTTTTGTGTCGTTGGAACAATATATTGTAGAACATCACGCATATTCCGAGTTGTGCA
CATCGCAGCAAACGTGGCTGCGATCTCGCGGATATGAGCTGGACACACGTTCCCATCCAC
TACATGGAACAGTAAGCTGCACAGGTAGTTCCATTTTAAAGTGGGAGTCGGACTGAATGC
ATGAAAACATGAAAATATCGTCTCGTGTGCTTCGTCAAAAATCGATTGCATCAAATCCAA
TGCAAATTGCACGTAGCAAATCCGATTAGACTTGACCACGCCCGCTCGCCT
(2331 bp)

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