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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17396c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_MYCBP2_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.94 TPM:0.92
ORF EntryO_TrvaFAMAMG20205_internal:A_TrvaFAMAMG_TR17396c0_g1_i6
Sequence
(Nucleotide)
GCGGGGCGGACGGGGCGCGGGGCGGGGGAGACGCCGTGCCACTACCGCCCGCGCTCGCGC
TGTTGTACGAACGGACGCGGTTGGGAGTACCCTCGCGACTTGTTGCCATGGGGCTCATAG
TGCCGGATACCGTATCCTTAGATCCAGTAGCGAACAGCTGCACCGGTTCGAGCATTTCTT
CAGCATTTTCAGGCGAAGTCTGAGTGCCGGCCTGCGTCAAGCGACTGCCCGAACGCTTCT
CTTGATCTTCTGTAGCCTCCTCTACCTCCAGATCAATGTCGCTCTCGAGTATAGGACTAA
CTTCCTTGAAATTATCGCTAGCCGTCGGCTTCTGCTGACGACTGGGAGAAGACCATTCCT
CATTGTTGCCGTTACTGCGTCGCGTGGTTGACGGTGAAGCCTCACGGCTCTGTCTTCTAG
AAACAAGAAGCGCTTCCTGAACGATCATAGCTTCCCCATCGACATCGACATCGTTTGTTT
CAGCCATTGGTTCTGATTGGGATGGTTGCTCACTAGGACCATCTGGTGCGACTTCTGCAT
CTTCATCATTCCATGATATCGGTTCATCGCAAGCGCCGCTCCAGCCTCCATCCTCCTCCT
CCGGTATAGGGCTACTGGGTTCGACAGGTTCCAGAAGTATTCTGTCAAGATGTCTGTTGT
GCTGAAGACACCACGCTACTCCAGAACTTTCCTCGGCGTATGCATTTGCGCATTCCATAC
TCAAACGTAACCAGGTACCGTCTTTGTTCACAACCTCTTCTACAAATTCAATATCGTCGC
CTGGTAAAACGCAACCTATCTCTTCAGATTGCAAGCTGGGGCTAGCTCGGACCCTGAGAC
CAGCACTGTTCTCGGCAGTGAAACAGCGCAGCCGTGAAACCGACGGTTCCGGCTCTTCAG
GCTCAGGTTGTGGGACGGGCTGACTGCCTTGCGACCCGTCAAAAATCTCGATTGTTAATT
CATTCGGTACTGGGATGTCGTCCATGGTGCACTTGAAGACATATTTTCCCGGAGAGCGCG
GCGTCCACGGCGCGAAGAACGTTCCATCGAGCTGTAAACGTACAGTGAGGCGTTCAGCCG
GCGTGCGTCCCGTCCCTCCGAACGCTATTGCGTTAGGCATCGACCGACCCCAAGCTCCGG
CTCCGAAACGAATTTCTTCGAATGAAAAGTTCTGATACGCCTTCATCATTGTGATGGCTT
GGAAGCACATGTTGTCTTTAACAGTAGGTTGGTATGCTGCATCAGGTAAAGTTCCGTTGC
TGGAACCTGCCGCCCTCGTAGCCCGACCACCGTTTTGCTCCAAACGTTGAACTACCACCT
CGACTTTTAGTGCTGGTGACGTGACGTGTTCTCCATACTGATCTCTAACAAGCACCGGCA
GCATCACTTTGTTGTTAAGTTTAGGTGGGTTGCTTGGTGCCTTTAACTCGCAGTTTTTGG
GCTCGACTCGAGAAGTAGGTGCCAACCAGCGGGCCAAACGTCCACCTGCCGTGTTCTCGT
CACCGCCGACGAAATCAGTCAAAAACTGCCTCTCGGTGGTTACACATTGGTAGAGTGATT
GTCCTTCGAATATTTGATGTATCGTCGGGAGGGAAGTGAGGTCCAGTCCTCTGGATAGGA
AGAGCGCTTCGCACGCATCGTGGGACATCTCGTCTTCGACGCCCGGATGATTGTTCCTCA
TCATTGCGTGGAGTTGTACCTCCACTAATGTAGCTGAGCTCATGGGAGGTATCTCCAGAT
CAGGTGATAGTAGTTTGGAAGCGCACGACGCTCCGGCGTATATGAGATCCATCTCCAAAG
ACAACAGACCTTGCTTTATTGACGGCAAAGAGTCTTCATAGCCGACTGCCAGACAACGGA
AACCGAAGCGGCTCTCTTCATTGTTGGCTTTGTTGTACTCGGTGAGATAATCCGAAGCCG
TTTCCAATGAAAATATTACTTCATTGCCAGGTACCAGCAAAGCTCTTTGTGGCCATTCGG
CCGCTACGTTGGCGAGCTTTGGTGTAACGCTGATGTAAGTGCAATTGTACTGCATGCACG
TAGATTCAGCGTCAACGATTTCGTCCACATAATCGTCTAACTCGGTGTCCGAAGTCAACC
GTACCAGTTTCTTCTTGAAAGGTGCTACAGCGTTTTGTTCGTCACTGCAATGACATTTAT
GTTTGGGCGCTCCGGCCACTGCGTACACGGTCAGGGAGTCTTCAGGCTGAGCTGTGACGC
TTCTCGGGTCCATCTCTAGGACGATCCAGGATACTGACACCGGGAACAGGACCCTCATAT
TAGAGACAGTAGCTGGTTTATATGGGTGTTCGCTCTCAACCCAGCTGTAGTACTGAGCTG
CTCCGCCGGCTAAGTTAGCTGTAGGCATCGCCAGATTGATAGCAGCGATGTGAGGCAAAA
GCTTGCGAACCATTTCTAGCAGCTTGATCACGCACTTCGGTTCATCAATAGCATCAATGC
TGGCCAACATATGAGGTACGAGCATGTTGATAGCAGGAGACTGTTCGAACACGGAAACAT
TCCTTCTCAGGTCATCGAGCGAGATCTCGTTGCGCAATGTGCAGAACAGTTCTATTATAT
TCTCCAGTACAAGGCACACGACTCGCATTGTGATAGTACGGAGACCTAGCTCCGTGGAGT
CCGTACTCTCTGATGTAGAAGGAGCAGGGGATCGCGAGTAGTAAATGAGGCTAGGTATTT
GTCCCCTAGCGAGAGTGGTTCCGTTGAAACTGAGCGAGCAGGATGCAAAACGGAACGTGG
TACCGTCAGGACCGTTCACTGAGGGCAGACCACAGTCACCGTTCGCTGTTCGACCGCCGT
GGTTACACAGCCTTATAGCGTAGCGGACGTCCTCCTTAAGCGGTATAGAACGGTCAAACT
TCAGTTGAACCATTTCGTGTTGACAATCAACCGCGCTGAAAGCACCGTGGGCGACTTCAA
CGCTGACCCAACAATGGGCTGGGTTCATCTCTTCAGGCGAAGAACGTGATTGCCTAACAT
CATTAAGCAGCTCAATCGAGTACTCGTAGTTTCCGGTACCGCCGTAAACGCAGACTCCTA
GTAACATCACCCCGGGTCGGTCGACGGTGAAGCAGATGGCGTCGGGGCTTCCGTTTCCGG
TGTTCCATGCGCGAGACTGGTTGACTCGCATGAAACGGGACGGGGTTACCAGTTGCCTGA
CGGCTGAGCAGTCCACCTCATCCCTGATATGGTTAGCGCTGTGTGTAAGTTCAGAGACCG
CTCTAACAATGAACTTGCAACAGAACTCCGCCTGTCGCTCGTTGTGTCTGATCTCGCCGT
GATCGTGCGGCGCGTTGCAAGGGAAACTGGTAACGTTGCGTTTTATAGGGAGCAACACCA
TGTCAAGTAGTTTTTGAAGCAGATCCAACAGATGCCACTCGGTGAAATGACGCTTAATTT
CCGGTAAATCCGGACGTCTCATTTCATTCAACAAATACTTTTGTGTCGTTGGAACAATAT
ATTGTAGAACATCACGCATATTCCGAGTTGTGCACATCGCAGCAAACGTGGCTGCGATCT
CGCGGATATGAGCTGGACACACGTTCCCATCCACTACATGGAACAGTAAGCTGCACAGGT
AGTTCCATTTTAAAGTGGGAGTCGGACTGAATGCATGAAAACATGAAAATATCGTCTCGT
GTGCTTCGTCAAAAATCGATTGCATCAAATCCAATGCAAATTGCACGTAGCAAATCCGAT
TAGACTTGACCACGCCCGCTCGCCT
(3745 bp)

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