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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17396c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_MYCBP2_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.28 TPM:0.28
ORF EntryO_TrvaFAMAMG20204_5prime_partial:A_TrvaFAMAMG_TR17396c0_g1_i5
Sequence
(Nucleotide)
AACAAATTATTTATGAATTTGGTCGGTATAGAAATATGACCATTTGAACAGACACTCCTC
CATAGATAAAGTTTTAAGACAAAGTACCTGGTGCGACTTCTGCATCTTCATCATTCCATG
ATATCGGTTCATCGCAAGCGCCGCTCCAGCCTCCATCCTCCTCCTCCGGTATAGGGCTAC
TGGGTTCGACAGGTTCCAGAAGTATTCTGTCAAGATGTCTGTTGTGCTGAAGACACCACG
CTACTCCAGAACTTTCCTCGGCGTATGCATTTGCGCATTCCATACTCAAACGTAACCAGG
TACCGTCTTTGTTCACAACCTCTTCTACAAATTCAATATCGTCGCCTGGTAAAACGCAAC
CTATCTCTTCAGATTGCAAGCTGGGGCTAGCTCGGACCCTGAGACCAGCACTGTTCTCGG
CAGTGAAACAGCGCAGCCGTGAAACCGACGGTTCCGGCTCTTCAGGCTCAGGTTGTGGGA
CGGGCTGACTGCCTTGCGACCCGTCAAAAATCTCGATTGTTAATTCATTCGGTACTGGGA
TGTCGTCCATGGTGCACTTGAAGACATATTTTCCCGGAGAGCGCGGCGTCCACGGCGCGA
AGAACGTTCCATCGAGCTTCATCATTGTGATGGCTTGGAAGCACATGTTGTCTTTAACAG
TAGGTTGGTATGCTGCATCAGGTAAAGTTCCGTTGCTGGAACCTGCCGCCCTCGTAGCCC
GACCACCGTTTTGCTCCAAACGTTGAACTACCACCTCGACTTTTAGTGCTGGTGACGTGA
CGTGTTCTCCATACTGATCTCTAACAAGCACCGGCAGCATCACTTTGTTGTTAAGTTTAG
GTGGGTTGCTTGGTGCCTTTAACTCGCAGTTTTTGGGCTCGACTCGAGAAGTAGGTGCCA
ACCAGCGGGCCAAACGTCCACCTGCCGTGTTCTCGTCACCGCCGACGAAATCAGTCAAAA
ACTGCCTCTCGGTGGTTACACATTGGTAGAGTGATTGTCCTTCGAATATTTGATGTATCG
TCGGGAGGGAAGTGAGGTCCAGTCCTCTGGATAGGAAGAGCGCTTCGCACGCATCGTGGG
ACATCTCGTCTTCGACGCCCGGATGATTGTTCCTCATCATTGCGTGGAGTTGTACCTCCA
CTAATGTAGCTGAGCTCATGGGAGGTATCTCCAGATCAGGTGATAGTAGTTTGGAAGCGC
ACGACGCTCCGGCGTATATGAGATCCATCTCCAAAGACAACAGACCTTGCTTTATTGACG
GCAAAGAGTCTTCATAGCCGACTGCCAGACAACGGAAACCGAAGCGGCTCTCTTCATTGT
TGGCTTTGTTGTACTCGGTGAGATAATCCGAAGCCGTTTCCAATGAAAATATTACTTCAT
TGCCAGGTACCAGCAAAGCTCTTTGTGGCCATTCGGCCGCTACGTTGGCGAGCTTTGGTG
TAACGCTGATGTAAGTGCAATTGTACTGCATGCACGTAGATTCAGCGTCAACGATTTCGT
CCACATAATCGTCTAACTCGGTGTCCGAAGTCAACCGTACCAGTTTCTTCTTGAAAGGTG
CTACAGCGTTTTGTTCGTCACTGCAATGACATTTATGTTTGGGCGCTCCGGCCACTGCGT
ACACGGTCAGGGAGTCTTCAGGCTGAGCTGTGACGCTTCTCGGGTCCATCTCTAGGACGA
TCCAGGATACTGACACCGGGAACAGGACCCTCATATTAGAGACAGTAGCTGGTTTATATG
GGTGTTCGCTCTCAACCCAGCTGTAGTACTGAGCTGCTCCGCCGGCTAAGTTAGCTGTAG
GCATCGCCAGATTGATAGCAGCGATGTGAGGCAAAAGCTTGCGAACCATTTCTAGCAGCT
TGATCACGCACTTCGGTTCATCAATAGCATCAATGCTGGCCAACATATGAGGTACGAGCA
TGTTGATAGCAGGAGACTGTTCGAACACGGAAACATTCCTTCTCAGGTCATCGAGCGAGA
TCTCGTTGCGCAATGTGCAGAACAGTTCTATTATATTCTCCAGTACAAGGCACACGACTC
GCATTGTGATAGTACGGAGACCTAGCTCCGTGGAGTCCGTACTCTCTGATGTAGAAGGAG
CAGGGGATCGCGAGTAGTAAATGAGGCTAGGTATTTGTCCCCTAGCGAGAGTGGTTCCGT
TGAAACTGAGCGAGCAGGATGCAAAACGGAACGTGGTACCGTCAGGACCGTTCACTGAGG
GCAGACCACAGTCACCGTTCGCTGTTCGACCGCCGTGGTTACACAGCCTTATAGCGTAGC
GGACGTCCTCCTTAAGCGGTATAGAACGGTCAAACTTCAGTTGAACCATTTCGTGTTGAC
AATCAACCGCGCTGAAAGCACCGTGGGCGACTTCAACGCTGACCCAACAATGGGCTGGGT
TCATCTCTTCAGGCGAAGAACGTGATTGCCTAACATCATTAAGCAGCTCAATCGAGTACT
CGTAGTTTCCGGTACCGCCGTAAACGCAGACTCCTAGTAACATCACCCCGGGTCGGTCGA
CGGTGAAGCAGATGGCGTCGGGGCTTCCGTTTCCGGTGTTCCATGCGCGAGACTGGTTGA
CTCGCATGAAACGGGACGGGGTTACCAGTTGCCTGACGGCTGAGCAGTCCACCTCATCCC
TGATATGGTTAGCGCTGTGTGTAAGTTCAGAGACCGCTCTAACAATGAACTTGCAACAGA
ACTCCGCCTGTCGCTCGTTGTGTCTGATCTCGCCGTGATCGTGCGGCGCGTTGCAAGGGA
AACTGGTAACGTTGCGTTTTATAGGGAGCAACACCATGTCAAGTAGTTTTTGAAGCAGAT
CCAACAGATGCCACTCGGTGAAATGACGCTTAATTTCCGGTAAATCCGGACGTCTCATTT
CATTCAACAAATACTTTTGTGTCGTTGGAACAATATATTGTAGAACATCACGCATATTCC
GAGTTGTGCACATCGCAGCAAACGTGGCTGCGATCTCGCGGATATGAGCTGGACACACGT
TCCCATCCACTACATGGAACAGTAAGCTGCACAGGTAGTTCCATTTTAAAGTGGGAGTCG
GACTGAATGCATGAAAACATGAAAATATCGTCTCGTGTGCTTCGTCAAAAATCGATTGCA
TCAAATCCAATGCAAATTGCACGTAGCAAATCCGATTAGACTTGACCACGCCCGCTCGCC
T
(3181 bp)

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