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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17396c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_MYCBP2_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.18 TPM:0.17
ORF EntryO_TrvaFAMAMG20200_internal:A_TrvaFAMAMG_TR17396c0_g1_i2
Sequence
(Nucleotide)
CGAGCATGTAAGGCACATGAAAAGTGTTTTAACCGGTATAGGGCTACTGGGTTCGACAGG
TTCCAGAAGTATTCTGTCAAGATGTCTGTTGTGCTGAAGACACCACGCTACTCCAGAACT
TTCCTCGGCGTATGCATTTGCGCATTCCATACTCAAACGTAACCAGGTACCGTCTTTGTT
CACAACCTCTTCTACAAATTCAATATCGTCGCCTGGTAAAACGCAACCTATCTCTTCAGA
TTGCAAGCTGGGGCTAGCTCGGACCCTGAGACCAGCACTGTTCTCGGCAGTGAAACAGCG
CAGCCGTGAAACCGACGGTTCCGGCTCTTCAGGCTCAGGTTGTGGGACGGGCTGACTGCC
TTGCGACCCGTCAAAAATCTCGATTGTTAATTCATTCGGTACTGGGATGTCGTCCATGGT
GCACTTGAAGACATATTTTCCCGGAGAGCGCGGCGTCCACGGCGCGAAGAACGTTCCATC
GAGCTTCATCATTGTGATGGCTTGGAAGCACATGTTGTCTTTAACAGTAGGTTGGTATGC
TGCATCAGGTAAAGTTCCGTTGCTGGAACCTGCCGCCCTCGTAGCCCGACCACCGTTTTG
CTCCAAACGTTGAACTACCACCTCGACTTTTAGTGCTGGTGACGTGACGTGTTCTCCATA
CTGATCTCTAACAAGCACCGGCAGCATCACTTTGTTGTTAAGTTTAGGTGGGTTGCTTGG
TGCCTTTAACTCGCAGTTTTTGGGCTCGACTCGAGAAGTAGGTGCCAACCAGCGGGCCAA
ACGTCCACCTGCCGTGTTCTCGTCACCGCCGACGAAATCAGTCAAAAACTGCCTCTCGGT
GGTTACACATTGGTAGAGTGATTGTCCTTCGAATATTTGATGTATCGTCGGGAGGGAAGT
GAGGTCCAGTCCTCTGGATAGGAAGAGCGCTTCGCACGCATCGTGGGACATCTCGTCTTC
GACGCCCGGATGATTGTTCCTCATCATTGCGTGGAGTTGTACCTCCACTAATGTAGCTGA
GCTCATGGGAGGTATCTCCAGATCAGGTGATAGTAGTTTGGAAGCGCACGACGCTCCGGC
GTATATGAGATCCATCTCCAAAGACAACAGACCTTGCTTTATTGACGGCAAAGAGTCTTC
ATAGCCGACTGCCAGACAACGGAAACCGAAGCGGCTCTCTTCATTGTTGGCTTTGTTGTA
CTCGGTGAGATAATCCGAAGCCGTTTCCAATGAAAATATTACTTCATTGCCAGGTACCAG
CAAAGCTCTTTGTGGCCATTCGGCCGCTACGTTGGCGAGCTTTGGTGTAACGCTGATGTA
AGTGCAATTGTACTGCATGCACGTAGATTCAGCGTCAACGATTTCGTCCACATAATCGTC
TAACTCGGTGTCCGAAGTCAACCGTACCAGTTTCTTCTTGAAAGGTGCTACAGCGTTTTG
TTCGTCACTGCAATGACATTTATGTTTGGGCGCTCCGGCCACTGCGTACACGGTCAGGGA
GTCTTCAGGCTGAGCTGTGACGCTTCTCGGGTCCATCTCTAGGACGATCCAGGATACTGA
CACCGGGAACAGGACCCTCATATTAGAGACAGTAGCTGGTTTATATGGGTGTTCGCTCTC
AACCCAGCTGTAGTACTGAGCTGCTCCGCCGGCTAAGTTAGCTGTAGGCATCGCCAGATT
GATAGCAGCGATGTGAGGCAAAAGCTTGCGAACCATTTCTAGCAGCTTGATCACGCACTT
CGGTTCATCAATAGCATCAATGCTGGCCAACATATGAGGTACGAGCATGTTGATAGCAGG
AGACTGTTCGAACACGGAAACATTCCTTCTCAGGTCATCGAGCGAGATCTCGTTGCGCAA
TGTGCAGAACAGTTCTATTATATTCTCCAGTACAAGGCACACGACTCGCATTGTGATAGT
ACGGAGACCTAGCTCCGTGGAGTCCGTACTCTCTGATGTAGAAGGAGCAGGGGATCGCGA
GTAGTAAATGAGGCTAGGTATTTGTCCCCTAGCGAGAGTGGTTCCGTTGAAACTGAGCGA
GCAGGATGCAAAACGGAACGTGGTACCGTCAGGACCGTTCACTGAGGGCAGACCACAGTC
ACCGTTCGCTGTTCGACCGCCGTGGTTACACAGCCTTATAGCGTAGCGGACGTCCTCCTT
AAGCGGTATAGAACGGTCAAACTTCAGTTGAACCATTTCGTGTTGACAATCAACCGCGCT
GAAAGCACCGTGGGCGACTTCAACGCTGACCCAACAATGGGCTGGGTTCATCTCTTCAGG
CGAAGAACGTGATTGCCTAACATCATTAAGCAGCTCAATCGAGTACTCGTAGTTTCCGGT
ACCGCCGTAAACGCAGACTCCTAGTAACATCACCCCGGGTCGGTCGACGGTGAAGCAGAT
GGCGTCGGGGCTTCCGTTTCCGGTGTTCCATGCGCGAGACTGGTTGACTCGCATGAAACG
GGACGGGGTTACCAGTTGCCTGACGGCTGAGCAGTCCACCTCATCCCTGATATGGTTAGC
GCTGTGTGTAAGTTCAGAGACCGCTCTAACAATGAACTTGCAACAGAACTCCGCCTGTCG
CTCGTTGTGTCTGATCTCGCCGTGATCGTGCGGCGCGTTGCAAGGGAAACTGGTAACGTT
GCGTTTTATAGGGAGCAACACCATGTCAAGTAGTTTTTGAAGCAGATCCAACAGATGCCA
CTCGGTGAAATGACGCTTAATTTCCGGTAAATCCGGACGTCTCATTTCATTCAACAAATA
CTTTTGTGTCGTTGGAACAATATATTGTAGAACATCACGCATATTCCGAGTTGTGCACAT
CGCAGCAAACGTGGCTGCGATCTCGCGGATATGAGCTGGACACACGTTCCCATCCACTAC
ATGGAACAGTAAGCTGCACAGGTAGTTCCATTTTAAAGTGGGAGTCGGACTGAATGCATG
AAAACATGAAAATATCGTCTCGTGTGCTTCGTCAAAAATCGATTGCATCAAATCCAATGC
AAATTGCACGTAGCAAATCCGATTAGACTTGACCACGCCCGCTCGCCT
(3048 bp)

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