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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17119c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		putative_ubiquitin-protein_ligase_BRE1_[Danaus_plexippus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016032 P viral process
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
Transcript
Level		FPKM:4.58 TPM:4.49
ORF EntryO_TrvaFAMAMG20057_complete:A_TrvaFAMAMG_TR17119c0_g1_i2
Sequence
(Nucleotide)
TTTCATTCTTCTATCTCTTTCTCTCTGCCGGCAGTATCATTTCGGCCGTGCTTATGAGTA
GACGTATCGCCGCTCGAGATAAGTCTTCTCTTCTCTTCTTCTTCTGCACTTCAAATTGAG
ATTAGTGCGCAGCCATCCTTTAAATCCACATTAAAGAAATGCAAAACAATGCAATTAGTC
GTTGAATGTCAATCGACTGCAGACATAAAGGCAGATATGTCAACATTCCAAGATATACTT
GATTCCAGGCTGTCATCACTTGACGATATTCAGCCAAACCAGTCCAATGGTGACAAAGAA
GACATATTTGAGAACGACCTCAAAGATACTATAACAAGTATCTTCGACGAGGACACTGTA
GATGGTAGTGAAATGATTAAGAATATAATACCTCAAAACGATGACAGTAATTCTGATGAA
AAAGAAAAGCCCACAGAAGCTGAAAATTCTACGATAGATCTGAAATCTGCGGAAGATAAT
GACTTAGAGAATGACAATGAATCATCAAATCTTGATGCTAGTCAACCAGTGAAAGAGGAG
CCACTTGAAGAAGTTGAACAAGAAATTAACAAAATATTGGAACAAAAGTTAATAAATATA
CAGAATGACACAGCTCTGATTTCAGAAGCCGAGATTAAAACAGAAACTTCAGAAATAACA
AATACTGATGTCAACACTGGTGTCGTTGAGATTAAAACAGAGAAGGTTCCAGAAATTAAG
AATGAAGAGGTAATCGCTGATACTGAACCAATAATAAGCACCTCAACAAGACAAGAAAAT
TCAACCGAAACCGAAAACTACGCAGATATTGAAAAAGTAGAACAAACTTCAGAATCTATC
GAAATTGAAGCAGACAAAAATGATGAATGCATAGAAAAATCAACCATTGAAGAAGAATCT
AGTGTAACAAATGAAGAATTACAAACTAAAGTTGCTGACTGTATTGAAAATATCGATGAT
GATATTGCGGTTGTTACTGAAAAAGCAATAGAAATTATTGATTTAGATAAAAGTGAGAAA
TCGTCTTTAAATGAGGATGTTGTTAAAGATGTCAGTGATGAAAATGAAGTGATGGAGGTA
GTTCCTAGCAATGAAAACGAAACAAAATCTACCGAAGAAACAGACCAAGTGTCTCCAAAA
GATACAAATACCTCAGATTTAACTATGGAAGTAGATGAGACGCCAGAGGTGAATCCTCCT
GAATCTGTATCAAATAATCACATAATAGATCTAGATGAAATCACAGATAGTACCGTCAGT
ACTGAAACAGTTGAAAAATCTGAACCCGCACAAATACGGAAAGAACCTGAAAAAAGAATA
AGCAGACTCTCAAACAATTTAGATATACTTTCGGACGATGAAGAAGAATCTACTCCAACC
GTAACTAAAAAAAACGAGGCTCCTGTTACTGAAGAAACAAAAATCGATCCCGTCAGAGAA
TCTGCTAAAACTGATGATGATGATGATGATGATGATGACATAGTTGTAATAGAAGATGCT
AAAGATACGACGGATGAGAAATCAACTAACAATGAGGAAATAAAAACTGATGTTCCTGAA
AATGAAAAAGTTGCGGTAGTTGAAGAGTGTGCAGAGAAGAAAACTAATTTTATGGAGTCT
ATAGAGTTATCGTGTAATAAAACCCTCAAGGATGAAGAAAAAGAACTTACCAAAACGGAT
GAAAAACTGAAAGTTCAAACTACCGAGTTATTGAAGCAAACTAAAGAAAGAAAAGAAGAA
ATACCAGAAAAGCCTCTAGTCACCACGGATTTTCTCAAAACGTCAAAGAAAACCTTAGCA
AGTATGACGAGAGACGAATTAGAAGAATTCTGCATCCTAAAAATAGTTGAAAGCGTTGTG
GACCGAATCAATTTTTCGGAAACGCAAACCAAATTAAAAACATTATCACAGCATCTAGAC
GATTACGAGAAGAAATCTAAAATGCTCGCAAAACAAAATAGAGATCTTCAGGTCGTTTTG
AAATCGATACAAGAGGAACAGAAGAAGACATTCAGCAACTCGCAACCTATAACACCTTTG
AAGATAACAAGATCAGTCGGAATGCAAGTCTTGATGCCAGAAAAGACGGTAGTTACCCGA
AAGAAATCAACACCACAAGCGCCCAACGTGGTGCCTCCACTGAGCGTTATCAGAACAAGG
AATCAGACCCAAGCCAGTCAAAAACCGACCCCCCCAACAAAACCCCCGAACAACGAAAAT
ATCCCCGTACCGAGACTAATACCGGCCAACAATAGTGCTAAAAACAATACTCCTATTAAA
ACACCGAGTCCAAGTTCCAGTAAGGTCGGTAGTCCCATGAATGGAATTCGAACTGCGCCT
CCTCAAAAAGTTGAAAAACGATCGATGAGTAAAGACCAAGCTACAGTAGACCTTACTGAT
GATGAGCCTCCTGCTAAGATAATTGCGCGGAACCCTCAGCCGCCAGTTCGGTTGGTGTCA
CCGCAGTCTCTAATGGCACCGCAAAGGTCACCATTCGGCCAAGCTATGAATAGCCCTAGA
AAAGTTTTCATTCCCATTAATAGTACGAATAATTCAGTCAGACCTACTCCGACTGTAATG
ATCAAAACACATCATCCTGGAGCTCAACGACAAAGACCTAATACACCTATGAGGATACAG
AGTCAAATTAAAAACAGATCCAATATGCCGCACCGGCATCCCGCGCCCCTACCAGAAATC
ATGAAACAATATAACCCTCCTAATTGGAAAGCGTTACCGCCCGCTCCCGACTTGAAACTA
TCCAAAGTAGAAAACGGTATAGTGATATCTTGGAAAATAAACGGATACCAAGAAGACAAT
CATGAGGAAATAGCCAGTTATCAATTATATGCCTATCAGGAGACAGCGGCGCCCCCTAAT
ACCGCTTTGTGGAAAAAGATTGGTGATGTTAAAGCATTACCGCTACCTATGGCATGTACT
TTAACTCAGTTTACAGCTGGCTATAGTTATTATTTCGCTGTGAGAGCGGTAGACGTCAAA
TCCAGGCTCGGACCTTTTAGCGAACCCAGCAGTATACTATTGCCCCACAAAATGTAAGAC
TGAATTGTTTAGCATCGATTGATGGAAGTAAATATTGTGATCCCCGTAATAATGGTGAAA
CTCAAACCAATGTGATTGTTTTAAGTTGTATTTATGTTGTACGTTTTAAAGTTATTATTT
AGTATTAATATGTGCTGTTGTAAATTGCGATTTAGGTGTTGCTAGGCTAAATAATGAAGA
TTCTGTATCGCGCACAAATGTCGGAGTCAACCATTTTTTTGTACCTTATATTGCGCGTTT
GACTTGCGACTTTTCTACACTATTAGGAAAAATGTACATTAATTCCTTTTACTAAAACAG
ACTAATGTTTGATGTTTATAATAGCTAAGACTAGCCCTTATATGTATCAAAAACAAAGAA
AAGCAATAACAAAGGCTTAACTGTACAGTATCTATTGTTCTACAGATTATACTATATAAA
TATAAGTATCTATGTAAATTGTTAAATATTGTCAGTTCTGCTATTTAAATTATGAAAACT
TGCTGCATATAAGGGTAATAAAGAGCAATGTAAGTAAATGTGCATTAAAATTCTACTATG
TGGACACATAAAATATTTGTTTTCCTAAAACTGCAAGTTACTACATAATATTCAAACAAT
TATAGTTATTGTGTTTCATTTACATTTCTTTTCATTTTATACCTTTACAAAGTGATTAAA
ATAAT
(3725 bp)

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