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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17119c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_ubiquitin-protein_ligase_BRE1_[Danaus_plexippus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016032 P viral process
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
Transcript
Level		FPKM:4.86 TPM:4.76
ORF EntryO_TrvaFAMAMG20056_complete:A_TrvaFAMAMG_TR17119c0_g1_i1
Sequence
(Nucleotide)
CGGACACTCGCCGGCTGTTTTTGAAGGGGTAACAACACTGCCGATTGTAAAAATTGAAAT
AATTGTTTTTCCGTTGCCGATTTCTACCACATTCGAGACTTCTATCTTGACTTGGTGACG
TTTCGCCTTCGGATTGTGCGCAGCCATCCTTTAAATCCACATTAAAGAAATGCAAAACAA
TGCAATTAGTCGTTGAATGTCAATCGACTGCAGACATAAAGGCAGATATGTCAACATTCC
AAGATATACTTGATTCCAGGCTGTCATCACTTGACGATATTCAGCCAAACCAGTCCAATG
GTGACAAAGAAGACATATTTGAGAACGACCTCAAAGATACTATAACAAGTATCTTCGACG
AGGACACTGTAGATGGTAGTGAAATGATTAAGAATATAATACCTCAAAACGATGACAGTA
ATTCTGATGAAAAAGAAAAGCCCACAGAAGCTGAAAATTCTACGATAGATCTGAAATCTG
CGGAAGATAATGACTTAGAGAATGACAATGAATCATCAAATCTTGATGCTAGTCAACCAG
TGAAAGAGGAGCCACTTGAAGAAGTTGAACAAGAAATTAACAAAATATTGGAACAAAAGT
TAATAAATATACAGAATGACACAGCTCTGATTTCAGAAGCCGAGATTAAAACAGAAACTT
CAGAAATAACAAATACTGATGTCAACACTGGTGTCGTTGAGATTAAAACAGAGAAGGTTC
CAGAAATTAAGAATGAAGAGGTAATCGCTGATACTGAACCAATAATAAGCACCTCAACAA
GACAAGAAAATTCAACCGAAACCGAAAACTACGCAGATATTGAAAAAGTAGAACAAACTT
CAGAATCTATCGAAATTGAAGCAGACAAAAATGATGAATGCATAGAAAAATCAACCATTG
AAGAAGAATCTAGTGTAACAAATGAAGAATTACAAACTAAAGTTGCTGACTGTATTGAAA
ATATCGATGATGATATTGCGGTTGTTACTGAAAAAGCAATAGAAATTATTGATTTAGATA
AAAGTGAGAAATCGTCTTTAAATGAGGATGTTGTTAAAGATGTCAGTGATGAAAATGAAG
TGATGGAGGTAGTTCCTAGCAATGAAAACGAAACAAAATCTACCGAAGAAACAGACCAAG
TGTCTCCAAAAGATACAAATACCTCAGATTTAACTATGGAAGTAGATGAGACGCCAGAGG
TGAATCCTCCTGAATCTGTATCAAATAATCACATAATAGATCTAGATGAAATCACAGATA
GTACCGTCAGTACTGAAACAGTTGAAAAATCTGAACCCGCACAAATACGGAAAGAACCTG
AAAAAAGAATAAGCAGACTCTCAAACAATTTAGATATACTTTCGGACGATGAAGAAGAAT
CTACTCCAACCGTAACTAAAAAAAACGAGGCTCCTGTTACTGAAGAAACAAAAATCGATC
CCGTCAGAGAATCTGCTAAAACTGATGATGATGATGATGATGATGATGACATAGTTGTAA
TAGAAGATGCTAAAGATACGACGGATGAGAAATCAACTAACAATGAGGAAATAAAAACTG
ATGTTCCTGAAAATGAAAAAGTTGCGGTAGTTGAAGAGTGTGCAGAGAAGAAAACTAATT
TTATGGAGTCTATAGAGTTATCGTGTAATAAAACCCTCAAGGATGAAGAAAAAGAACTTA
CCAAAACGGATGAAAAACTGAAAGTTCAAACTACCGAGTTATTGAAGCAAACTAAAGAAA
GAAAAGAAGAAATACCAGAAAAGCCTCTAGTCACCACGGATTTTCTCAAAACGTCAAAGA
AAACCTTAGCAAGTATGACGAGAGACGAATTAGAAGAATTCTGCATCCTAAAAATAGTTG
AAAGCGTTGTGGACCGAATCAATTTTTCGGAAACGCAAACCAAATTAAAAACATTATCAC
AGCATCTAGACGATTACGAGAAGAAATCTAAAATGCTCGCAAAACAAAATAGAGATCTTC
AGGTCGTTTTGAAATCGATACAAGAGGAACAGAAGAAGACATTCAGCAACTCGCAACCTA
TAACACCTTTGAAGATAACAAGATCAGTCGGAATGCAAGTCTTGATGCCAGAAAAGACGG
TAGTTACCCGAAAGAAATCAACACCACAAGCGCCCAACGTGGTGCCTCCACTGAGCGTTA
TCAGAACAAGGAATCAGACCCAAGCCAGTCAAAAACCGACCCCCCCAACAAAACCCCCGA
ACAACGAAAATATCCCCGTACCGAGACTAATACCGGCCAACAATAGTGCTAAAAACAATA
CTCCTATTAAAACACCGAGTCCAAGTTCCAGTAAGGTCGGTAGTCCCATGAATGGAATTC
GAACTGCGCCTCCTCAAAAAGTTGAAAAACGATCGATGAGTAAAGACCAAGCTACAGTAG
ACCTTACTGATGATGAGCCTCCTGCTAAGATAATTGCGCGGAACCCTCAGCCGCCAGTTC
GGTTGGTGTCACCGCAGTCTCTAATGGCACCGCAAAGGTCACCATTCGGCCAAGCTATGA
ATAGCCCTAGAAAAGTTTTCATTCCCATTAATAGTACGAATAATTCAGTCAGACCTACTC
CGACTGTAATGATCAAAACACATCATCCTGGAGCTCAACGACAAAGACCTAATACACCTA
TGAGGATACAGAGTCAAATTAAAAACAGATCCAATATGCCGCACCGGCATCCCGCGCCCC
TACCAGAAATCATGAAACAATATAACCCTCCTAATTGGAAAGCGTTACCGCCCGCTCCCG
ACTTGAAACTATCCAAAGTAGAAAACGGTATAGTGATATCTTGGAAAATAAACGGATACC
AAGAAGACAATCATGAGGAAATAGCCAGTTATCAATTATATGCCTATCAGGAGACAGCGG
CGCCCCCTAATACCGCTTTGTGGAAAAAGATTGGTGATGTTAAAGCATTACCGCTACCTA
TGGCATGTACTTTAACTCAGTTTACAGCTGGCTATAGTTATTATTTCGCTGTGAGAGCGG
TAGACGTCAAATCCAGGCTCGGACCTTTTAGCGAACCCAGCAGTATACTATTGCCCCACA
AAATGTAAGACTGAATTGTTTAGCATCGATTGATGGAAGTAAATATTGTGATCCCCGTAA
TAATGGTGAAACTCAAACCAATGTGATTGTTTTAAGTTGTATTTATGTTGTACGTTTTAA
AGTTATTATTTAGTATTAATATGTGCTGTTGTAAATTGCGATTTAGGTGTTGCTAGGCTA
AATAATGAAGATTCTGTATCGCGCACAAATGTCGGAGTCAACCATTTTTTTGTACCTTAT
ATTGCGCGTTTGACTTGCGACTTTTCTACACTATTAGGAAAAATGTACATTAATTCCTTT
TACTAAAACAGACTAATGTTTGATGTTTATAATAGCTAAGACTAGCCCTTATATGTATCA
AAAACAAAGAAAAGCAATAACAAAGGCTTAACTGTACAGTATCTATTGTTCTACAGATTA
TACTATATAAATATAAGTATCTATGTAAATTGTTAAATATTGTCAGTTCTGCTATTTAAA
TTATGAAAACTTGCTGCATATAAGGGTAATAAAGAGCAATGTAAGTAAATGTGCATTAAA
ATTCTACTATGTGGACACATAAAATATTTGTTTTCCTAAAACTGCAAGTTACTACATAAT
ATTCAAACAATTATAGTTATTGTGTTTCATTTACATTTCTTTTCATTTTATACCTTTACA
AAGTGATTAAAATAAT
(3736 bp)

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