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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17090c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_low-density_lipoprotein_receptor-related_protein_2_isoform_X3_[Bombyx_mori]
Ontology
GO:0001523 P retinoid metabolic process
GO:0003281 P ventricular septum development
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007507 P heart development
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030139 C endocytic vesicle
GO:0030900 P forebrain development
GO:0031526 C brush border membrane
GO:0035904 P aorta development
GO:0042359 P vitamin D metabolic process
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0060976 P coronary vasculature development
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.19 TPM:3.12
ORF EntryO_TrvaFAMAMG19972_5prime_partial:A_TrvaFAMAMG_TR17090c0_g3_i1
Sequence
(Nucleotide)
TTTTTTTATACTGAAAGGTACTTTAATAAATAATTAACACATTCACACAAAACATAATCA
CACTATAATACAATAAGTTACACAAGACTCTCGGTCGAGTAAACTCACACACGCTCAAAA
CTTATAGTTAAACTTATAACTAAATTACAATTCTACAGTATCGGAGGAATGTATGCTTCA
CAATAATTTTTTAGTCCTACCATTTAGAAACATCTTTCAAGAACGATATTTAATTAGATA
GCTCTAATTGCTTATTGCAAGTTTTGCAAATAAAATAGGTAGGTATATAAATAAACTTTT
CTTTTTTAGCAGTTACGAGAATATTCAAAACAAAGACCACATTGTAAATTAATATTCAAA
TTAAACCTTATTGCTAAGTACATTGTGGTCTTATTGCTACAATTGTTTAGCCACCTTTAT
TGTGTGTAAATTTTATTAAAGTCATTAAATTCTACTCTTTCAATTGTAATTGCATGTTAT
TGTTGTAATTGCTGATTTGATTTGATTAATGCCCGTTGACTTTATTTTTATTTCTCCGAC
TTGAACTCAATGCGATGAAGATGCCAGTGTGTAATCTACTCTTTGTGAAAAATACCCTAC
TCTTTATTTATAGATATATCATTATAGATACAAATGTGTGGATTATAAGAAATCTAAGGG
TTCCATACTCACACAGTCCTTAAATTATTTTACCTCACTTTAATTTTCGAGACGATAGTG
TAGGTATTAAAATAATTGGAATGTAAAATCTTAGCGACTAGCAATCGCAAATTTACGAAA
TGGTACGAAATAAATAATATTATTTTACAAAAATATAAATTAAAAAAGTATGTATCTTTA
AATTTATTAAATGTTGAGCATTGAGATCTAGTTTGCAATGTTGTCCATATAGAGTCTCGG
TTCTCTTTAAGGCGTACTAGGTAATGGACATCTACAAACAGAGCATGCTATTTCATCGCT
GTTATCGCCGCATCCGTCTCGTCCAGAACAGGCGACTGCTGTGCTTCTACATCGACCATT
TCCACATCGAAGCGGGCAGAAGTCAGCAGCCCGCCATCTTGACGGTTCGGTGCATAGATG
CGGTGGTTCATCAGATCCGTCCTTGCATGATATGATCGCGTTACAGAACTCGTATTCCGG
TAAACATTCGCCGGAACCGCAACGGAACGTGTGACGGGGACAACCTCTACGTCTCGTGGC
TTTACAATTTCGCTCGTCCTCGCCTCCAGGACACTGAGGAGTTCCATCGCATCTAGATGC
TCTTGATACACATGGAGACCCAGGGCCTCCACACCTAAACGAGTTTATCGGGCAGCGCTC
GCCTGTGCCATCTCTACCAGTACCTTGACACTTCTCGTCAGATCCATCAGAACAGTCCTT
ACGGCCATCG
(1390 bp)

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