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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16878c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]
Ontology
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
Transcript
Level		FPKM:4.90 TPM:4.80
ORF EntryO_TrvaFAMAMG19706_complete:A_TrvaFAMAMG_TR16878c0_g1_i1
Sequence
(Nucleotide)
CGCGGAGTATGAACGAGTCGCATTACCGCAGGCGCCGCGCCTCGCCGCGCTCGCACCGAT
AACATCTGCAAATCTGATATTTAGGCCGCCGATATCGCGATAGGGTTCGATTTCGAGACG
CGCGACGGTCCACCGGCGACGTGCGCTGCCATGTGATCGCTCCCCGGCCGACGGGAGCCA
CTCGAACAAAAAAGCAGCCCGCTGATGTCTACCCCTCCCGGACGATACAAAAAAGGGATA
AAAACGTTATTCCTGGAACGTACACATGTGGATGCCGGGTGATCGTGGGTGCCAGTGTTG
ATTCTGCAGTAACGTCACGATGCCTCGAAGAAGCAGGTGGATGCACATGGTGACCGGGCT
AGTGGCCGGGGTCGTGCTAGGTGTGTTTCTTAAACTGTGTCTGAGGACTTCCTCGCGAAC
AAGCATCGAGGCTTGTCCGGAATCGGCGCGCTCTTTCATGGATCCGGAACCACTCGCGTT
GATAGGTCTCAATCCAAATGAAACTGTTCAAAATTCTAATAGAACTTTAGTGTTTGTTGG
AGTGATGACGGCTGAACAATATTTGACGACGAGAGCTAGGGCTGTGTACGACACCTGGGC
CCAGGACTTGCCGGGTCGTATCGCGTTTTTCAGTTCCGAAGTGTCTCGGGCGCCAGGCCT
GCCTCTAGTGCCGCTGCGTAACGTAGATGACAGCTATCCTCCCCAGAAGAAGTCTTTTCT
GATGTTGCTGCACATGTATGAGAAGTACGGAGACCATTTCGAATGGTTTATGAGAGCTGA
CGATGATGTGTTTGTTAGAGGTGATAAACTGGAGGAGTTCTTGCGTTCAGTGGATAGCCG
CAAGCCTCAGTTCATAGGGCAAGCTGGGAGAGGAACTAACGATGAAAAGGACGTGCTTGC
CCTCGATTACAACGAGAACTTCTGTATGGGTGGTCCAGGAGTGTTGATATCCCGTGAGAC
GCTGCGAAGAGTGGCTCCTCACGTGAAGTACTGCTTGAAGCACCTGTACTCCACTCACGA
GGATGTTGAGTTGGGTCGTTGTGTGGCAAAGTTCGCCGGAGTGTCCTGCACTTGGAGTTA
TGATATGCAAACAATTCTCCATCACAATGGCAGCGGCGAGTTAGCTTATACCGGTCGATT
GAAGGCGAGGGAAGTACACAGAGCCATCACTCTACATCCCGTGAAAGATCATCGACAAAT
GTATAGAATACATTCGTATTTCAAGAATTTCCGTATACAAGAGCTTCGAGAACGTTCTCT
GGACCTCCATCGGGACATCTCATCAGCTCTGCGGGAGCTCTCCGTCTCTCAGGAAGAAGT
TGAAGACTATCTACTACCAGGAGATGTTCCGTTGTTCCCGGCGAAGATAGGAGAACCGGG
GTATTTGGGTGATAACAAAATATTAGGAGCTCCAATAGACATGAACCGCTACAAACCGAC
AAACCTAGATGACATCGTGATCTTCGAGTTTATCAGCAAGAGTCTGTACTCTGCCTTCCA
CTCCAATCCGAAGAGAAGAGTGGAACAGCCACTGAAGGAGGCTCTGGATGACGTTATAAG
AGAGGTCATGGAGATAATAAACGCTCCATCTCGTCAAAGAGGTCGCGTGATAGACTTCAA
TGAACTCCTGTATGGGTACACGAGGTTACAGCCGGTGCATGGAGCAGACCACGTCCTGGA
TCTACTGCTGAAGTACAGGAGATACAGGGGCAGGAAGATGACGGCTGCAGTTAGAAGACA
TGCGTATTTGCAGCAGTCTTTTACTGCAACGGAGATAAGAGAGTTACCAATGGGAGATCC
GCCTCCGTTTGAAGACCCAGCCATATTGGAGAAGACTGAGAATGGAGTTTATCCGAACGA
CTATGAGGACTTTGACGAGGCCAGTCTCCAGCAAGGAAGTTTCCTAGACTTCGGCAAAAT
GAAGGTCAAAGAGGCCCTAGAGTCTGGTCTTATGAAGATCCAGAACAATTTACCTAAGGT
CCTACAATGGTATAGCGATGACGCCGAGGAGTACCCAGTATATGATAGAAAAATACATTT
TATCCTCCCTCTGTCTGGGAGACAAGAAACCTTCGGTAGATTCATGAGGAATTATGAAGA
TATAGTCTTAAAAAGTAATCAAGCTGCCTCTCTAGTTGTTGTAGTTTATTTAGATAGCAA
AAGTCCATTAGATTATAGGAATACAGAGTTATTAATAAATTATTATAATGATATGTACGG
GAAAGATATACAGATGGTGAGGATGGGGTCCAATGTTTTCTCTAGAGGAGCAGCTCTTAC
TGAAGGGCTCAAGTTGTGCGAGAGAGATGACCTCGTGTTCTTCATTGATGTTGACATGAT
GTTCAACCACGAGACCCTCCGCAGAATACGAATTAACACCATCAAATACCACCAAGTGTA
CTTCCCTATAGTGTTTAGTGAATATAACCCAGATGTTGTGAACGGCGACGACTATAACAA
AATCAAAGGTGACACTCTATTAATGGACACTGAATTAGAAACCTTCATGGATGAAGAAGA
GATACCGAAAACAGAAAGAGAATTAATAAATTTAAAGTACAGTCGTGAGATAAGTGACGA
TACAGGCTACTTCAGACAATACGGTTTTGGTATTCTAGCTATTTATAAATGTGATTTCGA
AAGTGTTGGTGGTTTCGATTTAAAGATTAAGGGTTGGGGTCTAGAAGACGTTCAAATGTT
CGAAACCTTAATAAAATCTAACTTAACTGTGTATAGGATAGCTGATGAGACTTTAGTTCA
TATATTCCACTCGGTTGACTGTGATAAAAACTTAGAGAAGAGTCAGTTTAAGATGTGTTT
GGGAACGAAAGCATCGACTTATGGTAGCGAGAAGCATATGGCGTATTACATGCTGAACCA
TCCCGAGGTGCTGTGGCCAGAGCCGGAGAAGGAAGCAGAAGCAGAAGAAGGTAAAGTTGA
GGATCCTGTACCTCCAGCAGCAGCAGTAGCCCCGCCAGCTGCACCGCCAGCCGTCGCACC
ACCAGCAGCAGAAAAGGCTCCTGAAAAACCCGCAGACGAAAAAGCTCCTGCTCCACCTGC
AGTAGAAAAGGCCCCTGAAAAGTCTGCAGAAGAGAAACCAGCTGTTCCAGCACCAGAGAA
GCCAAAAGAAAAAGAAGAGAAAGCTAGGTAGTACAGGGTTGTTTAGATAATTTTAGAGGT
TGTTTTGAATTGAGATTATGCGTTATATTATTGAGTGCCTTATTCAAATGATTATGGTTT
TAGAACTTTTATGAAGAATCACTTATGAGCATATCCAGTAGTGTTCCTACATCCCAGTTT
TGTGAGAATCGTAGTCGACAATTTAATAATTCCTCATTCATCTGGTTTACATCTAAAGAG
ACTTTATTAATGTCAATTTTGGCTATTTCTTTAAGCATGTTAAGTATAGGTGACATATCA
AATCAATAAAAAATATAAATTTCACCGACTCATCATACATGCTCAAATCTTTTCTAGAAC
ATTTTTATATAAAGAGATGTCCCTATAACTACTGCCAAATAGTTCTCTAAGTACATTTGC
TCACAATATTAGAAACTTCAGTATATGAAACAATTTGATTGAATATAATATCGTCCATTT
GCAAAAACAACAGTAAGTATCTGTTTTTTTACGATGAATGTCGGAGATTTGTTGTACGTA
ATCTTGTTTATTTTCTAAGTTAGCCGATTTAAATGTAAATTCTGAACATAACAATCATAA
TAATTTGTACAAGACATTTTATAAGCTTCATGCCTAGATGTTGTTGCTAATAAAAAAACG
GGCATTTCGTCGCCTCAGTGCTTGTTTGGCCAATCTGCACTCAAGCAAATTTTACAG
(3837 bp)

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