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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16816c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106124467_[Papilio_xuthus]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001764 P neuron migration
GO:0002076 P osteoblast development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0009880 P embryonic pattern specification
GO:0010468 P regulation of gene expression
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0021902 P commitment of neuronal cell to specific neuron type in forebrain
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048704 P embryonic skeletal system morphogenesis
GO:0051216 P cartilage development
GO:0060021 P roof of mouth development
GO:0071310 P cellular response to organic substance
Transcript
Level		FPKM:1.00 TPM:0.98
ORF EntryO_TrvaFAMAMG19663_3prime_partial:A_TrvaFAMAMG_TR16816c1_g1_i1
Sequence
(Nucleotide)
CGCTGTTGTTGTTGCTGCTGCTGCTGTTGTTGCTGCTGTTGTTGTTGTGGGAACTGTCGC
TGTTTTTAGCCGGAGACCGTTGCGGGGAGTGTATTTCGGTCTTAGTCAAATCTTTTGGTT
CTTGCTTTATGTCATGTACCTTAATTATATCAGGTGGCTTCGGAGATTCATGTTGAGCTT
CTTCTGGATCATTATTGTTCTTCTTAGTGGTTATCAAAGACAGTGGAGCATCAGGACTGT
CAGGGCGATCATCCTGATTCATATCAGCATCTTCTTCTAGATCTGATCCACCGTTAGACA
GATTATCTTCTGATAGAACCGACATGGGGTATCTGCCGGGGCTTTCAGACATTTGCATAG
GACTCTTCATAGAATTGTGATCCTGCGAACCATAGTGATCGTTTCCCACCATCAGAGATC
CATTGCTTGGGCTGTGGCTACGGCTGTTGAATCCGTTTACGCCAAGGTGACATCCAAGAC
CTCCAATATTGCGGAGTTCAGCTCTCTTCTGGGCCGCTCGAGCATTCTTGAACCAATATA
CGACATTGTTAACATCCAGAGGTTTACGACCGCGTCTAGATTCCAAGTTGTTGAGTTCTC
GCACGTATTGTTGTATCTGCTGTCTGCTCGGATGTTGGTTTTCGGCGAACCAGCGTTGGA
GTTTAGGTAATTCCAGTTCAGGATCAAAACTGGTTCGCATGCGTGTCTTCTGAGTTGGAT
ATTGGCTTTGTACCGTTTGTAGTGCGGGGTGTAAATGGTCTGGAATGCTATTCATTGTCG
GAGATCGGTTTTTTGGCCCCGGAGAAGGGTAACGACGAGGACTGAAAGGCGGTGGTCGAG
GAGACACCTGTGCGGTCCACCAAGATTCAAATTTCCTCCTCATATCTTCTGATGGTTCAT
GAAAGTTATGAGGTCCCGGTGTCCTATCCTGACCGCGACAGATTTGAGCCAGAGTGATCT
CATCCAATGGACAACCGGTAGACATGAGCAGTGGTCTGCTTTGCACCAGCAGCAGTCTAA
GAAGCTTGTCCTTTATGTCTTGCAGTGGAGTAGGTCTTGGTCTCAGCAGCTGGATCCTCA
ATGTAGCCACGGTGGTGAGTTCTCCAAGGACTTCGCCAACAGTAGCCAGTGGTCCATCAG
AGATCCTCTCGAAAGGCAGTGGCTTCCAGTTGTTGATTACCACTGTACCTTTAGCCGAAG
CAGCGAGCTCATGTGGATATCCGAGCCTCATCATAGCAGCCGGGACCAGTTCATGGAATG
CAGTAGCAGCTGGAATGATGACGTAGCTATCCGTCTCCACGATAGCTCGTCGTCTCCAGT
TGCCCTCCTCAAGAGAGGATACGGCTTCCACCACGCAGTGGACTGGCAATGTTTTACCAG
AAATCCCTTTATTCAGCAAGTTATTGAAGGCTTCTTTCTTAGGAGACAGATGTGGTGTGT
GAGGGTTGCGGTCATGTACCGGCGCCGAAGGTGGACGCGGCACCATGCGCTCATCTGGTG
ATCTGCGAGGAGGCGTTTTGCTCCGACGAAGATCAGTTGATAGTGACTGTGATAAATCGC
TCGGCACCTCCGACTTGACGGTGTTGGCTGCAGCCCACGCCTCCGCAAAAGTCTCCATTG
CACTCTGAAAGTCCATCTTGTCAATCACGTCTATATCAACATGCCGAAATATCACTCAAC
ATGTGCACGGTGCCGGCAAACGGACAATGTACCGACACGTTCGTCTCAGCCGACCGGCG
(1739 bp)

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