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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16809c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		flap_endonuclease-1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.66 TPM:1.62
ORF EntryO_TrvaFAMAMG19652_complete:A_TrvaFAMAMG_TR16809c0_g1_i1
Sequence
(Nucleotide)
GCAAAAGCAGTTTGGGGTTTGCTGTATTGTTGTCCTGTGAAATTCTAGTAAAAATTCGAG
TTATCCTTTTCGTTTGATAAATTCTATGAATTAAACCAAGATGGGTATTCTAGGTTTATC
AAAATTAATAGCTGACATAGCGCCTCACGCCGTTAAAGAAATGGAAATCAAGAATTATTT
TGGAAGAAAAATAGCCATTGATGCCTCTATGAGTTTATATCAGTTTCTAATAGCAGTTAG
AAGTGAAGGAGCTCAACTAGTATCAACGGATGGTGAAACAACGTCCCACTTGATGGGTAC
ATTTTATCGAACCATAAGACTGGTTGAGAACGGCATCAAGCCAGTCTATGTATTCGACGG
TAAACCTCCGGACATGAAGTCTCATCAGCTGAACAAGAGGGCAGAGAGACGAGAAGAAGC
TGAGAAAGAGTTGCAAAAAGCTACTGAAGCTGGTGACCAAGCATCGATAGACAAATTCAA
CAGGCGTCTAGTCAAAGTAACGAGACATCACAGTGATGAAGCGAAGCAACTCCTCAAACT
GATGGGTATCCCCGTCGTAGACGCACCTTGTGAAGCAGAAGCACAGTGTGCGGCACTCGT
GAAGTCCGGTAAAGTTTTCGCGGCGGCCACTGAGGACATGGACGCCTTAACATTCGGAGC
GCCCGTGTTGGTCCGACACCTAACGTTCTCGGAGGCGAGGAAGATGCCCGTCCAGGAGTT
TCATTTGAGCAGCGTGTTGCAAGGATTGGAATTGAAACAGAAGGAGTTCATTGATCTCTG
CATCCTCCTCGGCTGCGACTACTGCGGCTCCGTCCGCGGCGTCGGGCCCAAGCGCGCCAT
CGACCTCATCCGACAACATCGCTCGCTGGACGAGGTGCTCCGGAACATCGACACGGAGAA
GTACCCGCCGCCGGCCGACTGGGACTATGAGAGGGCTCGGTCATTGTTTTTGGAACCTGA
AGTTGCTGACCCTAAGGATATTGAGCTAAAATGGACAGATCCCGATGAGGAAGGACTAGT
GAAGTTCCTGTGCGGAGACAGACAGTTCAACGAGGACAGAGTCCGGAACGGAGCCAAGAA
ACTAGCTAAGGCCAGGACCGGGACCACGCAGGGACGATTAGACGGATTTTTCACGGTAAC
AATGACGCCAAATTCGAAACGCAAAGCAGAAGAGGACAAGAAAAATGCAGCAAAAAAGAA
AGCCAAAACTGGCGGCCGAGGGAGGAAACCTAAATAGTAATATTAGTTTACGTTACTTTT
TGTCTATAAAAGATTAATTTAAAATCTCTAAACAATATTATTATTTAGCTACAAAACGTA
ATTTTAAAAAACATAAGTGCTGCTAATGTCTTAGATTAATGGTTTTTGTATAATTGAATA
ATGCTGGTAATTATTTTAAAGCTCCGTCGAAAATGGTTGACATATAAATTTTCAGTAACT
TAAGTAATACTTTCATGCATTTTGAACGGATTCTTACCACAATATTTAATTGAGTTGTCT
CGATATTTCG
(1510 bp)

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