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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16784c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_00180_[Danaus_plexippus]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0008023 C transcription elongation factor complex
GO:0009952 P anterior/posterior pattern specification
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000096 P positive regulation of Wnt signaling pathway, planar cell polarity pathway
Transcript
Level		FPKM:1.79 TPM:1.75
ORF EntryO_TrvaFAMAMG19626_5prime_partial:A_TrvaFAMAMG_TR16784c0_g2_i1
Sequence
(Nucleotide)
ATTTGGACCTCCAATACAAAAACTCTCTTCAGAAAATAATAAGAAACACAAAGCAAAGGA
ACACAAAGAAGAGCCTCCCATGAGAAATAGCAGTTTTGTAAACCTATTTGGACCTCCAAT
ACAAAAACCTCCTAAAGTGTCCCCTGATCCTAAGAAAATTGAAAAAGTTACTCCACCAAT
TAAAACAGAGAAAAAAGAAAAAGAGAGATCAAGTTCTGATAAGAAATCCAAACATGAACA
TAAGGAAGCTAAATTAGAGAAGAATAAGGCCAGGGATGATAAAGAAAGAAACAGGTCCGA
TAAAGTGAAAACCCCAAGTAAAGAACAAGAGAAAGTCAAAGATAAAGCATCAAAGAGACC
AAGTGATAGAGCACCTTCTCCTGATGCTGCAAAGAAACGCTGCCTCAGTCCAATCCCACG
AACAACTAGTTCACCAATAACTACTAACAAAGTCCCAATCAATGCAGATGAATATAAACC
ACGAAAAAATATTGATGCCTTAGAACATAAAAAACCAAGACCTGAAGAAAAACAGGAAAT
AAAAACTGAGAAGGAAACTAAGGAGAAAAAGAAAAAAGAAAAGAAGAGTCATGATAGAGA
TAAAGAAAGGAAAGAACGAAAAGAACACAAAAAGGAAAGTCACAGACCAAAAGAATCCCC
AAAAGAAACTGTCAAAGAAACACCTCCAAAAGTCAAAGAAATAGTTAAAGAAAAAGAATC
ACCTCCTATAAAAGAAAAACCACCCAAATCAGAAAAAGCTGTTAATAAATTCTCAATAGA
AAATTTAAGGAAAACACCACCACCAGAAATTGAAGAACGAGCTGAGACACCTAAGAAAGA
TAAAAGTGATCCAGAAAGGAGACATAAACACAAGAAGAAAGATAAAAAGAGAGATGAATC
AAAAGAAAAACACAGAGATTCCAGCAAAGAAAAGAAACATAAGCATGAGAAAGCCAGAGA
GACACCCACAGAAAAGATTGTACATAGAGTGACACCCATTCCTAAAGAGAGGTTAATACC
AGAACAAACATCACCTATATCTGTAGATACAGCATCACAATGTAGCTCTAAGAGTGGAGT
CAATAAGCCTTTGCTGTTAGAAGGTGAAGAAATAAACAGCAGTCAATCTGATTCTGACAA
CTCTGTCATTTGTGAAGATGATGAACCCAAAATTGTTAAAGTTGAACCTCCATCACCTGA
GATAATCAAACAGGAACCATCTCCACAACCTGAACCAGAAGTTGAAGAAAAACCAGAACC
ACAACCTGTTGCTGAAATCCCTCCTCCACATAAAGAGAAATCTAAAAAACATAAAGATAA
ATCAAAAAAAGAAGAGAAACGTCGCAAACGAAAAGCTGCAGAGGAGGAAGAGGTTGAAAG
AAAAATTCCTAACACAGCTGAATCAGGGCCTTCTTACAATGACACTGAGTGGGGAGAAAG
CAGTGGGTCCACATCTATGGAAACTAAAGTTCAAGATAACGGAGTTTCCAGTAGTCTAGG
AGAAGATGCAGAACCTGGAGATCTTTCTCCAGATTACATGGAACAACTCCGCGATCTACA
ACAGAGGATTATGAAAATTAAAAACAACGAAGATCTAGAAAGGGTTGTAAACTTAATAGC
TGAGACAGGTCGTTACGAAGTAACTACCCAAACCTTTGACTTTGATTTGTGCCTCTTAGA
TAGATCAACAGTCCGGCAGCTCATACAACTAGTAGGCTGCTAACCATACCTTTATATCAC
AATAATTCTCATGAATGGGCTGAGTGACTGTGTTCTTGTTGGAATAGTTTAGCTTGTCGA
AATTAATGTCTTTAGATATTGTAAAATAGAATGCATTAAATAAGAAGTAATCTCAATGAA
TTGTGTATAAAGGGACTGCATTTTATGTAAATAATAATATATATTAACTAATAATTATTG
TCCTCTTAAATACACTAGTTAGCTTGTGTAACCTTAGACTTTGTGCAATATAGATAGGTT
TGTAATAATATAAGACTGTTGAAACATAGTTGAAACAATAACATATATTTTGTATATTTT
ATTGTATTTTCTCATTTAATGTAATGTTTTCTGAGACCGTCGGGAATCCGGAGTGTGGAG
GAGGCTATAATATTGTATATTGTTTTAAACTTGTTATGAACTTTGAACTTTTAGTGCTAT
CAGATTTCACATTATTTTAAGCATTTTTTAAATCGATTGTATTTTTATTTTAAGAATTCC
TTATTAAAATATCAGTACCTAATATTAATACAAGATTTTCGTAGAATAGAAATGAACTAC
TTATAAACTATGAATCAATTTTATAATGAAGTAATATATTGTACTGTTTTTGCAGTTTAT
AATAAACCTTGCAATGTTAAACAGCAATGGTAAGCGAATCCGCGCCACTAACACTTATCA
TGGTTGTCGTAATATTTTATAATAAAATCATGTAACGCGTAGTCTACAATAAGTTAATTT
TATCTAAATTAAAAATTAAGCAGAGTTTATATTTAAGTACCTATGTGTGTAAAAATTGAA
ATACGGTAAAATTTCATAAAGTACTCATTTTTAAGTTTATTTCATATCGTGTTTTGTTAC
GTAACTTATTTTATATCTATAGTATTTTGGAAAAAAGTTTT
(2621 bp)

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