SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16419c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_autophagy-related_protein_13_homolog_[Papilio_xuthus]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006914 P autophagy
GO:0010506 P regulation of autophagy
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0032147 P activation of protein kinase activity
GO:0035096 P larval midgut cell programmed cell death
GO:0045850 P positive regulation of nurse cell apoptotic process
GO:1990316 C Atg1/ULK1 kinase complex
Transcript
Level		FPKM:1.20 TPM:1.17
ORF EntryO_TrvaFAMAMG19542_complete:A_TrvaFAMAMG_TR16419c0_g2_i1
Sequence
(Nucleotide)
TGAAAACATGTTAAATTAAATGAGTTTTAAAATTGAGCGATATACACTCATTTGAGCATA
AAAGAGCATTTTATATAACTTGATAATATTTTAGATACGAACAACAGCTACTAGTCTCAT
TACTAAAACACCTCAATATTAACAATAGATTTGAGAACAAGACATTGAAGTATCATAAAA
CCTAATGTGTGTACTAAAGTGCACACTCAATCTTTCTCTTGAAACATGTACTCAACAAGC
ATAAATTAACATTAACAGCAATCTTAACAGTCTGCAATTGAGACAGAATCTACTTTATAA
TATTTCAAACACCGATATTATACACTGTGTTACAATACCAAACCAGTCTACATTGACTTA
CATAATATCAGATCCGCCTTCAGCACTGTTGCACATTGAAGCAACCATGCTATCAAACTC
TGGCACAGCTTCTTCGTACATTTTCAACTGTTTCGCCAGAGTATCGCGATCGGTTATAGA
GTTTTCGGGGAAATCTTTCCATTCTTTGGTCAATGCTCTGGCTTGTAGACATTCGTTGTA
GAAATTGGCCAGATCTGCTATTGGGCTTCCTTCGGCAAACGGGAATTCCATGACTCGGTG
ACATTTCTCAGCTGCATTGGTTCTAGGTATATCTATAGCCTTGCTGGTGGCGTGTCTTGG
AGATGAAGTGGCTGTTTTAGCAGCATCAGCAAGTAACTTAGCTGTTGGATCTGTTGGATC
TACATCATCAATGTTGAGATTCTGCAATTTATAATTGATTTGTTCTTTATCGGCAATCAT
CCAAGTCATCGGTGGTTCTGGTAAAAGCTGATCACATAGCGACAACTTCAACTCATCCAT
CTGCACTTTGTCAACAAATGCTGCATTTGTTAGTGGCTTCGTAAGGTCAAGTTCTTTTTT
CTCTTGAGTCCTCCTGTTCTTTTTCGGAGAGTCTTTGAAATGGTCACTTTTGACCATTAT
CTCATTGCCACTGGTTGTTATACCATAGGGAACTTTTGGTCTATCTTCAGGCAAAATGGT
CATCTTTGTTCGGTACGAAACTCCAATTGTAATCATTCCTATTGGTGTGCGCAGTTCACT
GATTTTAATGTTTCTGCGATTTTCACCCAGCTTATCGAAATTAGGTTCCCCGCTGAAGAT
TCTGTGTGAAATCTTGTAAGTCTCTTTGTGCTGAGTCCGAGCAAGTTTATAAGCTGGTGT
AATGCGGGAAATAGTCAGTGTTGACTTCAACATCACTCCCATTCTATAGTAGATCGTAGA
AGGTGTGCATAATTCAATTGAGTTTGTTAATCTTATGGTCCACAATTCAAGTATCATTTC
GTCACCCTCAGTAGTTCGGAGAGTGATCTCAATGGAAAGCACTTTAGATAATGCATCTAC
AACTTCACCGTTAAGAATGCGCTTTGTTTCCTCATTTACTCCGGGCTCATCAGGAACTGA
TAGGTTGAACCATTGTAAAGGTGGTATGGCATCGACATTGTTATGTGGCTTGAAGTCTTG
AGTAATTTTCTTTCCTTTTCTGCTCTGAACTACTATTTGAGCTACTTTTAGAGTGAGCAC
TTTTGTAAACTTGTGCAGCCTATGGCGTTCTTGTATTTCCGCATTGGATGCTGCCATTTT
TCTATACATTTATACGTTTTTTAAGTAAAACAAGTGGAACTGATGTTAATTCAAATCATA
GTAAAAATTTTACGCAGTATAAACTAAACTTTTTGTTTTATGGCGTCTGCACTTTTCGCA
CAACTTTAGAAATGTGTCTTAATGCACACTAATGTTATTGAATATGGTAAACTTTGTAAA
TGAAATATTTTTAGGTATTCTTTACTAATAATTATATTTATTCTGCCCGAAATTATGATT
TTTTTA
(1866 bp)

- SilkBase 1999-2023 -