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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16392c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_beta-1-syntrophin_[Amyelois_transitella]
Ontology
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0042383 C sarcolemma
GO:0043234 C protein-containing complex
GO:0045202 C synapse
Transcript
Level		FPKM:3.39 TPM:3.32
ORF EntryO_TrvaFAMAMG19530_3prime_partial:A_TrvaFAMAMG_TR16392c0_g2_i1
Sequence
(Nucleotide)
GTCAAATTTATGTATTGATTGTTTGAGTTATTTGCTGAGCCAAAATCCATTAAAAAGTAT
TTAATACTAAATAATAGTTTTAAGTGTATACCTCATGTTACTTGGAAAGAACATAACGAC
TATACTGTTTTCTTTGTGTGACCCGTAATAATTTTAATTGTTGCCATTGTATCAGACAAT
TTTCATACAACGAAGGAATTATTATTATGGTGGAAAACGGTGCCTCGAGTGGTGGTAGCG
ATAGCCCTAGTGCAACATGTGTACGTTCTGGTCTTCTGGAGACGCTCGTCCGTGGTGTGT
GGTACCGCGTCCACTGTTCTCTAGAAGATGACTATCTGAGCGTGTGCCTTGACGATGGAT
ATGATGCCACAACGACTTTGAATGGCACTCTCAACAACAACAACGTTGAGACCCCGAACA
GCGACTTCGCAGAGGTCCCGGAGGCAATCGCGAACCAAAAACGATTGGTACAAGTTGTGA
AATCTGACAACAATGGGCTTGGTATCTCAATAAAAGGTGGCATCGAGAATAACATGCCCA
TTTTGATATCAAAAATATTCAAAGGGATGGCGGCTGATTTGACTGAGCAGCTGTATGTTG
GTGATGCTATATTGTCTGTGAATGGGGAAGATCTTAAAGATGCCACACATGAGGAAGCTG
TTAAAGCATTAAAGAGGGCTGGTAAAATGGTACAATTAGAAGTCAAGTACCTCCGTGAAG
TGACACCTTACTTTCGTAAAGCGTCCATTATAAGTGAAGTGGGTTGGGAGCTACAACGAG
GTTACATGGCCGATACTCCACCGTCACCTCCGTCGCCGAGACGCCGCAGAGCCGATACTC
GCTACGTACCCTTACTTATGGCGTGTGTCGCGAAGAACTTACGTCATAATGATCCAGAGG
ACCGCACAATCGAGATATATTCGCCGGACGGTGTCCACGCACTGGCGTTGCGTGCGAGCT
CAGCGGCCACGGCGTCGGGCTGGCATCGTGCGCTGCACGCCGCCGCGCGACGCGCCGCCC
GAGCCGCGCTCGCACGCGCTCGACCTAGACTCCGCCCCCTGGTGGGAGACGTGCGGTACG
CGGGCTGGATGGCGAGGCGACCGCCGCAGGATCACATGAGTGCTTCAGGAGGATCTGACA
GTTCCGATGAAACAGAAGGCTGGCAACCAACTTTTGTAACAATAACAGACAGAGAACTAA
GGTTGTACGAGGCAGCCCCATGGTCAGCCGAGGCGTGGTGCACGCCCTGCGAGAGCCTGC
GCCTGGCCGCGACCCGCCTGGCGTGGTGGCGTCGCGCCCCGCCCGGCTCGGCGTGCGCGC
(1320 bp)

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