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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16343c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_[Piscirickettsia_salmonis]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.06 TPM:3.00
ORF EntryO_TrvaFAMAMG19328_5prime_partial:A_TrvaFAMAMG_TR16343c0_g2_i1
Sequence
(Nucleotide)
TTACCTTATTGGTATTGAATTTAAGATTGTCACCGACTGCAACGCCCTGAAGGCTACAGA
ACGGAAAAAGGACTTACTACCCAGAGTAGCGCGCTGGTGGATTTACTTACAAGACTACAA
TTTTACAATCGAATATCGGAAAGGTGCTTTAATGCCGCACGCTGACTACCTAAGCAGGAA
TCCACCAGCAGCGCTAGTAAATCATGTTGACAGACCTCGAAACTGGGCCCAGATTGCACA
AAATGCAGATAAAGAGACTCAAGAGTTAATTCAAAAGTTAAATGAAGGTAGTCTGGATCC
CCAGAGGTACGTCTACCAAAAAGATTTACTCTACTATCGTTACACTCCTATAGGAGAAAA
TCCACGCCTTTTGTGCTATATACCAAAAGGCCATAGATTAAGTCTTCTACGGGTCTTTCA
CGATGAGCACGAACATCTTGGGGCAGAAAAGACTCTACATCTGATCCTTAAGCATTTTTG
GTTTCCCGGTCTTAGAACCTTCGTAAGTAAGTATGTGTCTCACTGTGTGTCTTGTATATC
AAAGAAACGTGTCCCTAGAGCTCCAGAACAACCGATAACATCTTGGGAGAAACCAGACAC
ACCGTTTGATACCATACATGTAGACTCTTTGGGCCCCTTGCCCGAGTCTAACGGCTATAA
ATTCATACTCGTCATCGTTGATTCTTTTACGAAATTTGTATTACTGTACCCCATGTACAG
GCAAGATGCAGAAAATTTAAAGTGTGTGTTTGATAAGGCGATTGCTTTGTTTGGTGTCCC
GAAATTATTGATTTGTGATCGGGGACGTATGTTCGAAGCTTCTAATTTTGTAAAACTGAT
TAATGATTTGGGTTGTGATATACATTATATCACGCCTGAAATGCACCATGCAAATGGTCA
GGCGGAACGTTACATACGTACCGTCTTAAATATGATTCGTATCGAAGTTAGTAATAAAAA
TACATGTTGGTCTGATTACCTATGGAAACTTCAATTAGTGTTAAACATAACGAAACAAAA
AACCACTAAATATTCTGCTCTAAATTTGTTAATCGGTACTGATGCAACCACTCCTGCACT
CCGTGCCCTAGTCCGAGATGTGGCGATTGAGGACTCTCATCCTGATCGACTGGCGTGGCG
CGAGTTGTGCAGAACTCGAGCCAGTGAGATGCTGAGAAATAACCGAGCGGAGCAAGACGC
TCGTGTTAACCGGGACCGACATCCTCCAAGAGTTTTTAAGCTTAGTGACCTAGTGTTTGT
GATTAAGTACTCCCAGAGCACGGGCAAGGTAGACTCCGGAATGAGAGGACCATATCGAGT
CACCAAAGTTTTACCAAGCGACAGATATGAGTTAAAGTTGTTAGCCGATGCCCGAGGGAA
ATTGACACAGGCAGCAGCCCAATATATGGTCCCTTGGAAAGGAGAGTGGTGCCCGGATAC
GTGTGCATCCTTTTTTGAATGTGAGTATTATTTTTACTTAATGTTGCAGGCGATTGACTT
CGCTGGTGTGACAAGTGTGAAGTACGGCTGTACATGAGTACTGGAGCCTGGAGATGCCCT
GGAGGAATCGCCATGGATTTGTTCATATGGATGTTTAGCTGTGTGCACATCCTGGGAGCT
TACATAGGTGTTTAGCTGTGTGCACACCTCTGATCTACAGTAATCGACGTAACTGAGCTC
TAACCGTAAGGAGAGCCCGAGGAATGTATAATGACTAGACACAGAACGGTAATCGGCAAA
TTCGATAAAATACACGTGCATATGCAGTGCATACATTCGAAAACGAGCATATTAGTTGGC
ATGCAAAAACATGCTAATTAATATGCAAAGGGGGGTTTCTAGTACGGCCGTACAGAGTGA
TGAATGTAAGAGACGAACGATATAATAAATTCGTATGACTGTGATAGTTCATCTTCCTAA
AGTACTTAGTATGGAAGGGGCCTTGAAAGCGAGACGAATGATCGGTTTGACAACTTTGCC
TAGTTTGCGCTAAACTAATGCAAACAATCGTTATCATGCATTACAGGTGATAACGATCAG
GATGATCCCATAGAGCCAGGACCTTCCAACCAACCTCACACGGACTCAGCAGAGGCAGTC
GTGAGAGAGGAGGTGCCCGAGGACGGACACGGTCAGGAGGGGCCGTGTTAGCGTCGATTT
ACTGTTTTTATTAATTTCTACTTGTTGGTTCGGAATAAAGCGCGTGACGTCATACTTTTA
ATAAAACTGTTGAGCGGCCGACGTGGAGGGGTATTTTTCTCTCGGCGCTCGTACAGATAG
GTTCTCGGTCGTCACGTAGCTTGCGAGATATTTAAATACACGGCTCTTGGTCTAGATAGT
TTATTTGGTGGTTGATTGTTTTCCTCTATAATTAAAATATTGTAATTAATCTAAAATTAG
TTATCAAATTGTGATTAGTGTTGATTTTATAAATTATACGATTGTTATTAGTGAATGTTT
TCTTTTTTTTTTAAATAAATCCACTTCTGGTTCCTAAAATCAGAAGTGGGATAGGCCTAT
GCTCACAAGTGTTAACAGGGAAACAATCAAGTACCAAAGCGCAATGCCTGGAGACTCGCG
GTCACGCAGTAAGTCCTCTGATTTTGCTTATCGTGCTCGGAAACGTACGCGTTCTCCTCG
GAAACGTCGTAACTCACGCGAACAAGAAAGTACCCCCGAAAGATCTCGGTCTAAGTATAG
GTACCTATCACGTAGGCAGACTCGCGATCGTTCTTGCAGCAGTCCATCCAGGACACCTTC
CCGATCCCCTCGTAATCGTTCTAGGAACTATATTCGAAAACGGGACAGGTCATGTTTACG
AGACTCGCGTTCGAGATCACGGGATTTGCACTCACGTCGCGACGTCTCGGTTAGACAAAC
TTTAAGCACAATAATCTCACGGCTTAACGCTATAGAGGGTAGTTCCATAGATGATTCGAG
AAGGTCAGCGCGTACCATACCAACCGTACCTAATACTAGTCAACGAGATCCGACTCCGCC
TTCCGCTAGCAACGCATTAGTCGAACTTTTAGGCGCAGCAATGACGAACAAGTCTCATAG
TTACTTCGTTTCGAATTTTGATCCTGAAATTAATGATATCACAGTATGGTGCGAGGAGGT
AGAACGAGCTAGGGTCGCGACTGGTTGGAGCGACACCGAGTGCCTATCGAGGGTATCCAA
CTGTCTGAAAGGTGATGCAAAAACCTGGTTAAACGAATGGGTTACAAACGATCGGTCGTG
GTCTAATTTTAAATTAGAATTTACTCCATTGTGCCCGCGCAGGTTAGACTATGCGAGCAT
TCTGTACGAAGTAATGCAAACTACATCGGATAAATATTCAACATATGCCGAATATGCCCG
ACGTTCGTTGCTACGTTTACGTATTGTCAAAGGGTTGAGCAATGATCTCATGATTCAAAT
TATAATTCGGGGCATAACAGACCCACAGGTTCGTGCAGCAGCTGCAAACGCCGACTTATC
TATTGACAATCTTATTTCATTTTTAGCCATTTACATTAAACCCGCGCATACAAGACTAGA
TTCTCGTCTACCCGCGAATTCGACGAAAACTCGCAACAAAATTGGTAGGTCGATTGTAAG
GTGTTACTCATGCGGAAAGAACGGTCATAAAAGCCAAGATTGTTTCAAAAGACTAGATAC
GTCGAATAGTTCTCGTCAACTCGCGATTGCGCATAAACCGGCAACTGTACCAACCTGTAC
CTTTTGTAAAAAAGTAGGACATAAAGAGAGTAATTGTTTTTCTAAAGAGCGTTCGGAATC
GCAAAAAAATTACCAAAATAGAAGGGTAAATTTATGTAAAGATGTTTCTAACGTTTCTAA
CAAAAATGATATTGTGACAGCGGTCATTCAGGGTATACCCGTGGATATATTGATAGATAG
TGGTGCGTTGAACGTCTCCTTGATCTCGTCTGATATAATTAAATTGTTTTCTTGCCAACG
TAAACTTACCAAGTGTCTCATTAAAGGAGTAGGCGAAAGAGAGATTTCCTGTCAGGAGTA
TGTCACTCTGACTATTGAATTCGAAAATATCTCTCTTGACGTTGATTTAGTTATTGTACC
GGGTTCCTGTATGAATACGCCTATTATAATCGGCACAGACGTATTAAACAGAGACGGCAT
TACTTATTATCGTACCAAAGACAAACAATACTTAACTCACAATTGTAATAGCCCCATTAA
AATTAACTCAGTCGGAAAAAAATTAATAAGCGGTATCAATACGCCACTCTTAGGTGATGA
ACTCGTTTCGTTGATGTCGGTGATTAATGAATTTTCTAAGTTTCTTATATCAGGCACAGC
GACCACAACAGTAACCACGGGACAGATGAGTATAAATCTCACTAGTGATACGCCAGTAGT
GTATCACCCATACCGTTTATCATATCAGGAAAAAGTTATAGTGAGGGAAATAATTAACGA
TTTACTAGA
(4449 bp)

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