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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16340c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_B-box_type_zinc_finger_protein_ncl-1-like_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030218 P erythrocyte differentiation
GO:0033333 P fin development
GO:0034243 P regulation of transcription elongation from RNA polymerase II promoter
GO:0035162 P embryonic hemopoiesis
GO:0035166 P post-embryonic hemopoiesis
GO:0046872 F metal ion binding
GO:0060215 P primitive hemopoiesis
Transcript
Level		FPKM:4.57 TPM:4.47
ORF EntryO_TrvaFAMAMG19311_3prime_partial:A_TrvaFAMAMG_TR16340c1_g1_i1
Sequence
(Nucleotide)
CCGAGATGTATTCCTCTTTTTAAAATGAGAACGTGACAAAACATTATTTAATTCACTGGA
GAAACCATTTTTGTTTGAAAAAAATATCTGTTTAGATTTGATGCTCATTTTTTATTTATT
TACAAAGTGATGAGTATTCTCGTAGTAACGGCGTGGTAAAACGACTTGCGCGTGTATTTA
TCATATTAACTGCAAATTAGAAGCTCTTGAAGACTATTATTACCAAAATAAAAAAAGTGT
AGCCATATAAGAAACATAAGCAATGGAAGAACTGAATGGGGAGATATATGGTGATGGATT
AGTCAGTCTTGGTGATGAGGGCTCTCTAGAATCTAATGAAAATGGCAAACATGAACAGGA
TTGTAAAATTTGCGACAATAAGTTGTGCAGCCCACGTGTATTGTCTTGCCTTCATGTATT
TTGTGAAGCCTGCATTGACAAGTTGATGGTTAATGAAGCTGGTGATTCACTTAAATTTGA
TTTGGCTGTAGAATGTCCAATATGCAAACAGGAAACTAAGATACCAGGCGGTGGAGCTGC
TTCACTACCTTCAGATTATGTCCTCACCAACATATTGGATGTTTCTACCATGGATCAATC
TGTTGTGTGCACTTGTTGTAAAAGCAAGGAACCGGCTGTTGCTAGGTGTACTGATTGTTC
ACATTTTTTGTGTTCCAATTGTAATTCTGCACATGAGTTTATGAGATGCTTTGAGAACCA
TCGCGTTGTGCCATTTGATGCCCTAAGATCTTCAAAGGAAAAAACCGCCGTTCATAAACC
GATTTTCTGCGCCCGACACGCTGGGGAAAGTCTCAAATTTTATTGCTGTGAGTGTGAAGT
AGGTGCTTGCACTGAATGCTTAACGGTGGACCACAAAGTTGGTGAACATCATTGTGAACG
CATTGTCGACGCGGAGCAGAATATTCGCGCAGAATTAAGAAATTTCATCATAGAAGCTAA
TACTCGCGCTGCTACGGCTGGCAGTGCATCTGCCAAACTTGATGATGCACTGGGTGACTT
ACAACGTCAGCGTGATGATGCCGAGAATATTATAAATGAGGCTTTTCGTGCTTTTCAAAC
AGCTCTGGAAAGAAGAAGAGATAAGGCTTTAGAAGAATTGGAAACCTTACACAAAGAAAG
AGAGTTAAAGGTCATGGATCTCTTTGATCGCGTCGACAAAACTATGCAACGAATCGATTG
TGCATGCAAATTCACTGCTAGACTTTTACATTGCGGAGATGGGACCGAAATTGTTATGTT
GAAGAAAACCGTATCTACACAGTTCGCACGATTGTTGGAAGGCGCGCCAGAATTTGATAT
TGATTATTCATTGGAGTTTGTCAGCAAAATGGATAACTTTGATGTATCTATTAACGAGAC
TTTCGGCAAGTTCCGCACTGAAGCCACTATCGCTGAAGAACGAAAGCGAGCAAGTGAATC
TTCCGCTATTGTGTCTTTACCGTCGAATTCGCACTCGCCAGCTGTGTCTGTAACTAATGC
TCCCGTATTCGACGATTTCCCCCCTATTGGTGTGCGTCGCGTTACTGGAGTATCTGGTGT
TGGTGGCATGGTCGGTGTCCCTGGAGTAGGTGGTGTGGGAGGTATGGGCGTAGGACCAGT
GCCCGGAGTTGGCGTTTCGAACACGAGTGTATTACCAGGAGGCGTAAATCTCAGTAATGT
CGGAGGCGTTGGATCAGTTACTGGTGTTGGTGGTGTTCCACCATTAACATCAATGGTAGA
ATACAATTTGCAACAACTGGCAAGCATAGCCGAAAAAGATGTGCCACCTCCTCAGCACAC
CTCTCCTGCTTCCTCTTTCACATTGGCAGAGTTGTTGGCTGGTGATCTGAATTCTTCTCA
AGCATACAATAATCTTCAAGCTCTGGCAAAACTGGGTTTGAATACTGAAGTGAACGGGTT
CGGAGGTGTTGGAGGGGTAGGTGGTGTTGGCGGAGTGGGCGGTGTTGGTAGTATTGGCGG
TGTTGGCCCAAGAGGCGTATCGCCTGGAAGACCGCTGCTCACTCCCGCTGAGGAAGCCGC
ATTAGTTGCTCCTCCGGCCCCTTTAGTGCGCGCCACTAAAGCTACACCTATGCATATCAG
ATTTAAGTTTGGACAACTTGGCGGTGGCAAGGGACAATTCAACTCACCCCATGGGTTTTG
CCTCGGAAACGATGAAGACATTATTGTCGCCGATACTAATAATCATCGTATAACAGTATT
TGATAAATCGGGCACCCACAAATTCAACTTCGGCAATGCGGGTAAGGAAGAAGGACAGCT
GTGGTATCCCCGCAAGGTAGCAGTAGTTCGCGCTACCGGCAAATTCGTAGTCTGCGATCG
TGGCAACGAAAGATCACGCATGCAAATTTTCACTAAAAACGGACATTTCCTGAAGAAAAT
TGCTGTCAGATTTATAGACATTGTTGCTGGCTTGGCTGTGACGGCCGAAGGATTGATTGT
TGCCGTCGACAGCGTTACGCCAACT
(2485 bp)

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