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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16339c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:10.84 TPM:10.62
ORF EntryO_TrvaFAMAMG19306_5prime_partial:A_TrvaFAMAMG_TR16339c1_g1_i1
Sequence
(Nucleotide)
AACATTAATTAGTAGCAGTGCTTATTGAATAATAATAATAGCCTATTTATTAGAGAAAGA
GCAAACAAAAATACATAACAAGTTTTATAAAATGTCTCTTAACTCTACATGCCTTCTGGC
ATAGGCCTCCTCCAACTGCTTCCATTGCGTTCTGTCTGCAGCCACCCTAGTCCAGTATGG
TCCCAAAGTCAGGCGTAATTCGTCTTCCCATCGTCTAGTTGGTCGACCTTGTCTTCTTAC
GCCGTCTCTCGGATACCACACCGTAATCTGCTTACTCCATTTGTTTTTATTGCAGCGAAG
CATATGTCCTGTCCACATCCATTTCTGGTGGTCGATGAGAGTAAGAATGTCAGCAATTTT
GGTTATTCTCCTAATTTCCAAGTGCGGTTTTTTTTCGCTAAGTTTTACTCCCAGCATACT
CCTCTCCATAGCTCGTTGACAGCGTTGAAGTTGTTTTCTGTGAGATTCCGTCAAGGACCA
AGTCTCACATCCGTATGTTAGGCAGGGCAAGATGCAGGTATTAAAGGTTTTTCTCTTTAT
ATGTATATTTATATCTTTATTTTTTAGTATCTCTTTGAGGGACCAGAATTTTCTCCAACC
ACAGGCTATTCTTTTATTTATTTCTTTTGACATCATGTTCTTTGGAGAGATAATCTGTCC
CAAATATACATATTCTGACACATATTCAAGTTGTCTTCCATCTATCTGAATGTTTTCCTC
TGTATTATTAGTTATTAGTTTTGTTTTCGATGCATTTATTGCCAAGCTAAAGTCTTTACT
CTGGTTTGCTAGAGATTGTATCATTTTCTGAAGTTTCTCAGGGCTTTCCTCAAATAGAAC
TATATCATCAGCAAATCTTAAGTGGTTCAAACGTTTACCATTAATGTTCAATCCTACGTT
GCTGAAGTCCAAGTTTCTGAAAATATTTTCTAATACTGCATTGAAAAGTTTGGGAGACAG
AGGGTCTCCTTGTCTAACACCTCTTTTTATTTGGAAGGGCTTCCCCTTTGATTCTAATTT
TATGTAGCTTCTGCTTTTCTCATATAATATTTTTATTGCATCTATATATATTTTATTTAC
TCCCTGTTGATTAAAGCTTTCCCAGATATAGTTATGGTTGAGACTGTCAAATGCTTTAGT
GAAGTCTATGAATGCTATATAAATTTTTTTTTGGTATTCAGAATATTTTTCCAAAATTTG
TTTTATGGTGTGAATATGGTCTATTGTGCTATAGTTTTTTCTGAATCCCGCCTGTTCTAT
TGGCTGATTTTCATCTAGGGTTTTTGTTATTCTTTCCAGTAATATCTTTGCAAAAATTTT
GTAAATATTTGAGATTAGGCTTATAGGTCTATAGTTTCCTATATCCTCTGTTGGCCCTTT
TTTGTGTAATAGTATAATACAAGATTCACACCACTGTTCTGGAATAGCTCCTGTGAAAAG
AATATCATTAAATAATTTCGCCAAAATTGGACTGAGTTCCTCTACTGTGCCCTTTAGGAT
TTCACAAGGAAAGTTGTCTGGGCCTGGAGCCGTCTCTAGTTTTTGTGAATTGATTGCATT
TCTTACTTCTGCTGTGATTATAGGTGGTACAGTTTCTGTGTTGTTTAGGTTTAAGGAATT
TCTCTGCTCATTTACTTTAGTTTCAGAATAGAGTTTCTTGAAGTAATCCGTTGCAATTCT
TTCTAGGTCAATGCGATTTGTGATTGTGCTACTTTCATTTCTTTTAAGGTTTGTAATCCA
TTCTTTTCCTTGCTCCTTTAAATATTTAAATGCTTTCTTTGTTCCACCAGTTCTTTGAAT
TTCTGATTCAAGTTTTTTCATTCTTTTTGCTTTTCTATCCTTTTTCATAGACTTTCTTAT
GAGTTTGCTGAGTTTTGATATTCTTTTTAAGTTTTCTTTACTTCTGTTTTCCGAAATGGC
TTTCATCCTGGCTTCTAAAAGTTTCATTGTATCATCACTATATTTTTCCTTATTTTTTGT
TATTCTATTAGTTAATTTCAATTTTTCCAAAGTAGTTTCCAGTTCATTATATTTTTCAGA
GACACTAATGTTTTCCTGCATTGTTTTCATTAATGGTTTTAGTACTGATGAGTCCATGTT
GTTTACATCATATTTTGTTGACCTTATTTTATCACCTATATTGTTTCTTGACATTTTGGG
TTGTTGTAAGAGCAAGCAGCAGCGTACCATACGGTGGTTTGTGTTGAAATTTAACTTCTG
TATGACATGTGTATCACTAAAGTATTTCCTTTTGTTTGTTAGAATAAAGTCAATTTCATT
CTTGTATTTTCCGTCTGGAGATATCCAAGTCCACTTGTTCTTAGGATTTTTTTTGAAGAT
TGAGTTTAGATGCACTAGATTGTTTTCCATTATGTAGTTTATCAATTTTTGACCATTACT
ACTTCGTTTTCCTTGGCAGTATTTACCCAAAACATTCTCTTCTCCTAATTCTCTACTTCC
TACTTGAGCGTTAAAATCACCCATGATGATTATATTATTGTTCTGGTATCTTTGTGTAAT
TTCTGATAGTTTATCATAAAAAAGTTCAATATCTTCTTTCTTACCTTGTTCTGTGGGTGC
ATAGGCTTGCACTATTGTCCAGGGTTTCTTATAATCTATCAGTTGAAGATTGAGTATTGC
AAGCCTGTCTGAAATACCTATAATTTCAATTATTTGATATTTCAAGGATTTGTTTATAAG
AAATCCTACACCTCTTTGGCCAGCTATCTCTCCCTTATGGTATAAAATGAAGTTTTGATG
TTCCTCTATTTTTTCACCGATTCTTCTCATTTCACTTATTCCCAAGATGTCTAGGTTGAT
GTTAGTGAGTGCATTTTCAAGTTCAAGCAAACTTTCTTGTGTTCTCAGGGTTCTGGTATT
GAGTGTTGCAATATGGATGACTGATTTTCTTTTTGTTGGAGGGTTTTGGTCTAGTCGTCC
CGCGGTGACCAGCCGTGTTGGGAGACATGTAGTTGTTTTGTGCAAATTGTTTAGTTGTGA
TATGTTAGTATTTCCGGTTATTGGTATTTTTGAGTTACATTTTGTTTGAGTTTTTATCCG
AAACTGATTGTGTCCGTCCTCGCATGTAATGAAATGCATTTTTTCCTTGAATTTTTGGGG
CATAAATTTTGTGACCTTGGTTGTCGGGGCTTGGTGTTTCCGACCTTTTTCTTTTGTCAC
TATCTTTGTATTTGTTTTTGTTATGTACCTGTTGTTTCTCTCTCTTTGCAGACAGTGCTT
CCTTTGTCAGGTCGTGTGTAATATAAGTATTTGGTTTCATTTTTTTCTTGCATTTTAAAA
TTTCTATTTTTTTTTGAAGAGTTGTTGTAGCCAAGAGAATTGGTCTTGTTTTAATGCTGT
TTTCAATTCTTTTTCCCAAACGGTGTACTTTGTTGATATCTCCATTCTCTAATTTGACAT
CTATTGCTTCCAATGTTGTAACTACTAGATTTGATAATACCTCGTAGCTTTCTTGTTCTG
ACTCAGGAATGCCGTGAAGAAGCAAGTTGTTTTTTCTGTTCTGAATTTCAAGAATTTTTA
TTTTATTGTTTAATTGTAAGATTTCACTATTTATTTTTACATTATCTTGTAATAATGGTT
GAAGTTTTTCGTCGACTTTTTGCAGAACTGCAGCAGTGATGTTTTCAGTTAATGTACAAG
TTTG
(3664 bp)

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