SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16336c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_1-phosphatidylinositol_3-phosphate_5-kinase-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0097352 P autophagosome maturation
Transcript
Level		FPKM:3.40 TPM:3.33
ORF EntryO_TrvaFAMAMG19269_5prime_partial:A_TrvaFAMAMG_TR16336c0_g2_i2
Sequence
(Nucleotide)
CGGGAACTTCGTTCCATTCCATCCGGGTGTCCCTTGACACCTCTCAAATTTTTTCTATGA
AAATATCTTCACTTAGCTGCGACAGTGTTTAAAATATGATTTATGCTATGAATTGTATGA
ATTAAGTTGTGATTAAATATCCTGGTGTCTTTTAAGTAAAAGAAAATTGGGCAGAAACCC
AACGATCTATAACGAGGATCCCACTAATGGGTAGTAACAGTTATATTAAGGAAATAAATT
ATTGTTAGAAACCTTTTATACCATATACATGCTAGCTACATCGACTCAAAATACAGGGTG
TAAAAAGAGCACTCCCGAAAAAGAAGACTGGTGGTAGTACTAGCGATACCTGGGATGAGA
AGTTGGGTAACTGGTCCATACAGACTGTTCGGAAAAATTTGTAGGTGTTTTTACGCTCAT
CCATTCTAGTTTAAGCTAATTAAAACTACTTTTATGAAAAATATCATTAATCTTCGTCTT
CGGGAGTGCTCGTTTTACATCCTGTATCGTCCAGTCCGTCCGTCCATTTTGCGTTGCTTC
AAACCGTACAAAATGGACATATCCTGTATCGAACTCAAATATCCTAATTATCGTGTCGTC
ATTAGGATATAAAAGAATTTAAGACTGTGACATGTCTCTTTTCAAACAAGGATGAAGAAA
AGTCCTGTATGGGTAGGTGATAGATAACGGCCCCTCATTGCCCTGACATTGCAGACTCGC
CATTTTGTTGGTCGGTCCCGTCAAACCTAATCGTGTTGTATAACATCCCAGTGTTGCGGT
ACATGTAGGAAGTACTTGCGAGCCGCCGCGCTGAACCGGCTGCGGTACTGCTCGGGGGAC
ACCACGGTGGGCTGCCCCGAACCGAGGTTCTTCTTGACGAGGTGCTCCAGCTTCTTGTCC
CATGTGAATGTGCGGATGTAGTCTATGATCCCCAGTACGAGCGTGTTGTTGTGTATGGCG
AGCAGCAGCGAGTAGTCCATGACGCCGAGTCGCGCGAGGAAGGCGGTGTCACGTGACACG
GCGCGCCACAGGACGCCGCCCGTCGCCGACTGCACGTACAACTGTCGTTCCCAACGAAGG
TTAAGCAAGTTCTCGTCCATGAGCACGTGTTGCGCGAGGTGCGGCTGTGGTTGCGGCGCG
AGGCGGTGTCGCGACGAGCCCTTGAGGTCGTACCGCGGCGCGTCGTCGCACGCGTACCAC
ACGTGCTCCAGCACCAGCACGTCCGCGCCGCACGCGCTGAACGCACCCACTATGCGGGCT
AATAAACTGGGCTGTTTGTTCTGTCGGTTCGAGTTCACGTAGTTGAAGTAGTGCGGTGCG
AATTCCAGGAATTGCTGGGATTCCGGTTTGGTCATCTCTTTCAGGACGAAACGATCATCT
TTAGTTTTGCAAAACGTGGATCCTGATTTCCCACCGCGAGCGGCCCAGGGCACACATTGA
GCCATGGACCGAATGAAGGATTCCTCTATGTCACAAACGTTCTTATCATCACAGACGCAG
GGTTGGTCGTGTCGCGTGTCGCCGAGCGGCGCGAGCGTGGCGTGTCGTAGTTGTGAGAAC
TGACGAGCGTAGTACACGCGACACGTCACTCCTTCCTTGAGTGTAACTTCAATATGTTCA
GTTGATTTCTCTTTAGATTTCTGTGCGTCGTTTTTCTCTTTACCCGTCGACGACGTGGAT
TCCATTTCGTCTTGTTCTGTTTGTGTAGGGTGTCGGTGTCTGGTCCGGATGTATGCGTGC
GAGGCGAGCGTGGCGGCGAGTAGGGACCCCAGCTGCGCGCCCCCCACCACCACCGGCAAT
ATACCGCTCACTATTATACCGCTATGGTTAGCAGGTTGGTTGTTAGACAGTAGTTGTGAC
AGTATCTGCCTGGCTGTCTTCTTCTCGCCTTTCTCTTCATCTTCCTCAACACCATTTTCG
CCGGAAGAATCTTCGACGTCCGATTTCTCTTCAACATTAGTATCAGGGGTGGGTTTGTTG
TTCTTCCCAGTGTTGGTCCACTTGTCGTGTGCGTCTCGTAACATCTTCTCGCCCACTAAT
ATACAGTCTGACACGTTCCAGAGGCGACGAATACAATCTCTAAGTGAGTCAGTCTCGTTG
ACATTAGATGAAGTGAGAGCGAGGTGTATTTGGTCCGTGTGCTGTTTGAACGACTGGTAT
TCTTTCTCTGCTTCCGGTTCCGAAATACTGCTGAATGTCTCGTGACCTTTAAGCATAAGT
TCGTTGAGTTGAGTTATGAGGTTTTCCCTCATCTGTTTGACGTCGTAGTTGATTGAAATC
TCTTCGGGGGGTAGTTGGATGTCATAGGGAGTTATTTTG
(2319 bp)

- SilkBase 1999-2023 -