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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16311c2_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		Nuclear_pore_complex_protein_Nup160-like_[Papilio_xuthus]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0031080 C nuclear pore outer ring
GO:0051028 P mRNA transport
Transcript
Level		FPKM:0.43 TPM:0.42
ORF EntryO_TrvaFAMAMG19051_complete:A_TrvaFAMAMG_TR16311c2_g1_i3
Sequence
(Nucleotide)
CGGATTTGAACTGCTGTAGCGGACATAATGTTATTGTTATAATAATGCATCTTATAAATG
GTAACAATTTAAAGTACATTAAGTACATAAGAAAACATAAAAATCCTAAACGTTTCAATA
TTTGTTATACATGTGGTTAATTGCAGTTCAGTTCTCTAACGTTCATCTTGTCCTAGCATC
GAGTACGCTTAAGGCATTATAGTATTAGAGGAACTGTAGGTAAGAGTGTTTTGTTACGTG
TCGTTGTGCAGGGGCGCGGCGTGCAGCCACAGCAGCGCGCGGTAGGCCTGCCAGTGCACG
GCGCAGTGTCCCGCGCCCGGCACCGCGCCCGCGCCGCGACACGCCCCCATCGCCGCCACC
GCGCCGCGCACCACGCGGGACCTCATCTCAGCCATTTGACGAATAGCTTCAGTGACTACA
GCCACGCCTAGATCGCTTGCAAATAAACTGTCATAATCGTTATCATCATCATCACTTCTT
GATATTTCAATTTCTGGGACATCTAATCGTAGCGCATCGTTCAATTCAAGCACAGCACTT
TGGAGATCTTTTATTGGCTCTAAGATTGCATTGAGTTCGTTGATTTGCTGAGGCGACAAA
ATCGGCGGCGAGTGCAGCAGATGCAGCAGGCGAGGCAGCAGACGGTGCTGCGGCGCGGCG
GCCGCGAACAGCTGTCGCTCGAGCACGTGGGCGCGCGCCGGACTCGCCGCCCGCTCCCAC
TGCGCGCCCGCCGCCACCACGCGCCGCGCCGCTGCCGACAGCGCACCCAGCCACGTGCCG
GTTCCAGATTCCAGCGTGTCTTCAGGTGAGAGCATCATTCGTTCGAGCGGTTCCAGCTCG
CACACCAGCGACACGCCCGAGCGACGCACCACGGTGCACCACCAGCCGCTCTCTACGTCT
GCTGAACTATCTGACACCATCAACCCAAGAGGTTTCTGTAATCCTTCCATATACTGCATA
CACCAGCTGTACAAATCTGACCAGCATTTGTGCATGAGGAGCGCGTGGTCGGCGGGCGGC
GCGCGGGCGGCCTGTGTCCGCAGACGGGCCAACACCGCCGCCATGGCCGCCTCGCCCAGC
TCCTCCTCCGCCCCCACGCCCGCCCCCGTCCCGCCGCACCACTTGCGGGCGTAAATCACC
AAAGCTTTCCTAATGACTGAGTGCGGGAAGAGTCCGGGAGCCAGCAGTCGGTCGCGGTAC
TGGTTGTGGTTGGAGAGCTGCGACAGCGGCGGGGGCGGCTCGCGACCCGCCACCGCCTGC
CACGACACCTCCGCGCCTACTGCACTACATGTAATTATGGTGTCGCCATCGGGTTGACTC
CAAAGCGCCCAAACCACGTGATTGTTATCTCCATAACCTATTTTATAGTCTAAAAGATCC
AACTGAGGTCCAAAAATTCGGCAAATATGAGAAAATCTTATAACTCCTCCAATTGATTCA
TGCATTTTCATCACAACAAACTCGCATTCATTTGGAAATGATAGATATGCAACAAAAATA
ATACTTCCGTCTAATCCTACTGTTTTCTGCAGCATGTGCCCATGAGGTGGTGGTTTCGGT
CTCACAGTAGTCTGAGACAGTGGGGCTGATACTGATATAGGTGCACTGCCTTCATCAAGA
GCCCACGCTCTCAAACATGTATCTCCACATACAGCAACAGTTACACATTTCGTGATGACC
ACTCCATATGTTTCAATACCATCACTACTCTTGCCCCTCAAAGCTCCTGTGATACCAGAT
AAGAAGCTGGGCACAGTTGATTCACGTTTTAATACCGTAGTGACAGCTGTTCCTGTCACT
GGTAGTTTAACTAACAACAAACTGCCTTCACCCTCATGTCCAAAAGCAAGGGCAAATACG
GCTTCACCATTCTCCCGTAAAAGTGAGGCACATGTGTGGGCAACACCAGTAGTTGCATTG
GAGTATTGATTCAATATGAAGTAATTATTAGGATTGTTTATAGATGTTGTGTCATGAAAT
ATAGAAGGTGATGTGCTGCTCAATGAACCATATGTAGACTTTCTATCCAATATGGAGGGA
TGAGGAAATACCATTCTATGAACTGATGAGACTGTGGCAGCTAGTATCACAACACTGTTA
CTGTTGCTCCCTTCATAAACAGTTATATTGCTCAGTGGTGGTGTTCCAGGAGCTACTTTA
CATCTCAAGTTAGCAGAGGAAAGATTTAAATCTAATGAAGCTTCTGATATTTCAATGGCA
TCTGATGTAGTTTGCCAGTAAATAAATCTATTTCTGCAGCAAGCTTTCGTAGAATCTTTA
TACCAATAGCCCCCAGCTTTTAAGGGTAATTTGATATCTTGAAGAGTACTATGCGTACCA
CCTGTGTTTAGTAATATTTCTTTCCATTTTTCAGGAACGCTAGTGTTTGGAGTTATTTCT
TTGAAAGTTACCGGCATCGCCTCAAGAAACTTCATATTGGGTTTTTAACTTGTTTTAATG
TAGCTCTTGGAATAAATGCAATATTTTCGTGTGATAATAATAAGCTAAACTAAACCTAAA
ACAACAAAATGTTTAAAACATCCCTAAGAATGACGAAAACAGCAGAAAATAGTGATTTTA
ACAAGTTTTT
(2590 bp)

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