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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16311c2_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup160_homolog_[Plutella_xylostella]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0031080 C nuclear pore outer ring
GO:0051028 P mRNA transport
Transcript
Level		FPKM:4.44 TPM:4.35
ORF EntryO_TrvaFAMAMG19048_3prime_partial:A_TrvaFAMAMG_TR16311c2_g1_i1
Sequence
(Nucleotide)
CGGCGGCGCGTGCGTGCGGCGCGGGGTTGGCCACGGCGGCGGACAGCGCGCGCGACGTGC
GCCCGCCGGACAGGTGCCACTTGAACACCACCCACTGGAACATCGATAAGTTCGGATCGT
CTTTGTCAGCAATACTGATTGCTGTCTCCGCGAGACGAACCACGCACGCGCCTTCGTCGT
GGATCTCAAACAATTTTATAACCTTCATGTAATACAGCACGAGTGCTTGGTGCTGCGTGA
GCTGCGCGGCGGGCTCGGCCACGAGGTGCCTCAGGAAGGGCTCGGTGCTGACTCCCTTGG
CGGCGCGACAGAACGCCGTGTACGCGCCCTCCGTGTCCTCCGCGTCTAACAACGCGAGCC
CCATTATGAATTGACGTGAGCATGCATTCCATTCACACCAGGGCTCGAGCATAGTAACGT
ACGTCTGCACGAGTCGCGGCTGGTTGATCCGCGCCAACCACCAGCCGAAGTCAAACCCGC
CGCTAACCGCCCAAAGTTGGTGCGCTAGATGGTAGAGGTAGTGCGGTAGTGCGTGTTGCC
AGGCGGTGTGCGTGTTGGCGGCGGCCAGGTGAGCGCGCGCACGCTCCCCGCCGCGGCCGC
GCGCGTACGCGGACACCACGCCCCCCGCGCCGCACGTCGCACCCCCGCCCCCGCCAGCAC
TGCACGCCGCGCCGCCCAGCACACTCAGCTTTAAACGGAACAGCTCCGACGGATTTGAAC
TGGTGTCGTTGTGCAGGGGCGCGGCGTGCAGCCACAGCAGCGCGCGGTAGGCCTGCCAGT
GCACGGCGCAGTGTCCCGCGCCCGGCACCGCGCCCGCGCCGCGACACGCCCCCATCGCCG
CCACCGCGCCGCGCACCACGCGGGACCTCATCTCAGCCATTTGACGAATAGCTTCAGTGA
CTACAGCCACGCCTAGATCGCTTGCAAATAAACTGTCATAATCGTTATCATCATCATCAC
TTCTTGATATTTCAATTTCTGGGACATCTAATCGTAGCGCATCGTTCAATTCAAGCACAG
CACTTTGGAGATCTTTTATTGGCTCTAAGATTGCATTGAGTTCGTTGATTTGCTGAGGCG
ACAAAATCGGCGGCGAGTGCAGCAGATGCAGCAGGCGAGGCAGCAGACGGTGCTGCGGCG
CGGCGGCCGCGAACAGCTGTCGCTCGAGCACGTGGGCGCGCGCCGGACTCGCCGCCCGCT
CCCACTGCGCGCCCGCCGCCACCACGCGCCGCGCCGCTGCCGACAGCGCACCCAGCCACG
TGCCGGTTCCAGATTCCAGCGTGTCTTCAGGTGAGAGCATCATTCGTTCGAGCGGTTCCA
GCTCGCACACCAGCGACACGCCCGAGCGACGCACCACGGTGCACCACCAGCCGCTCTCTA
CGTCTGCTGAACTATCTGACACCATCAACCCAAGAGGTTTCTGTAATCCTTCCATATACT
GCATACACCAGCTGTACAAATCTGACCAGCATTTGTGCATGAGGAGCGCGTGGTCGGCGG
GCGGCGCGCGGGCGGCCTGTGTCCGCAGACGGGCCAACACCGCCGCCATGGCCGCCTCGC
CCAGCTCCTCCTCCGCCCCCACGCCCGCCCCCGTCCCGCCGCACCACTTGCGGGCGTAAA
TCACCAAAGCTTTCCTAATGACTGAGTGCGGGAAGAGTCCGGGAGCCAGCAGTCGGTCGC
GGTACTGGTTGTGGTTGGAGAGCTGCGACAGCGGCGGGGGCGGCTCGCGACCCGCCACCG
CCTGCCACGACACCTCCGCGCCTACTGCACTACATGTAATTATGGTGTCGCCATCGGGTT
GACTCCAAAGCGCCCAAACCACGTGATTGTTATCTCCATAACCTATTTTATAGTCTAAAA
GATCCAACTGAGGTCCAAAAATTCGGCAAATATGAGAAAATCTTATAACTCCTCCAATTG
ATTCATGCATTTTCATCACAACAAACTCGCATTCATTTGGAAATGATAGATATGCAACAA
AAATAATACTTCCGTCTAATCCTACTGTTTTCTGCAGCATGTGCCCATGAGGTGGTGGTT
TCGGTCTCACAGTAGTCTGAGACAGTGGGGCTGATACTGATATAGGTGCACTGCCTTCAT
CAAGAGCCCACGCTCTCAAACATGTATCTCCACATACAGCAACAGTTACACATTTCGTGA
TGACCACTCCATATGTTTCAATACCATCACTACTCTTGCCCCTCAAAGCTCCTGTGATAC
CAGATAAGAAGCTGGGCACAGTTGATTCACGTTTTAATACCGTAGTGACAGCTGTTCCTG
TCACTGGTAGTTTAACTAACAACAAACTGCCTTCACCCTCATGTCCAAAAGCAAGGGCAA
ATACGGCTTCACCATTCTCCCGTAAAAGTGAGGCACATGTGTGGGCAACACCAGTAGTTG
CATTGGAGTATTGATTCAATATGAAGTAATTATTAGGATTGTTTATAGATGTTGTGTCAT
GAAATATAGAAGGTGATGTGCTGCTCAATGAACCATATGTAGACTTTCTATCCAATATGG
AGGGATGAGGAAATACCATTCTATGAACTGATGAGACTGTGGCAGCTAGTATCACAACAC
TGTTACTGTTGCTCCCTTCATAAACAGTTATATTGCTCAGTGGTGGTGTTCCAGGAGCTA
CTTTACATCTCAAGTTAGCAGAGGAAAGATTTAAATCTAATGAAGCTTCTGATATTTCAA
TGGCATCTGATGTAGTTTGCCAGTAAATAAATCTATTTCTGCAGCAAGCTTTCGTAGAAT
CTTTATACCAATAGCCCCCAGCTTTTAAGGGTAATTTGATATCTTGAAGAGTACTATGCG
TACCACCTGTGTTTAGTAATATTTCTTTCCATTTTTCAGGAACGCTAGTGTTTGGAGTTA
TTTCTTTGAAAGTTACCGGCATCGCCTCAAGAAACTTCATATTGGGTTTTTAACTTGTTT
TAATGTAGCTCTTGGAATAAATGCAATATTTTCGTGTGATAATAATAAGCTAAACTAAAC
CTAAAACAACAAAATGTTTAAAACATCCCTAAGAATGACGAAAACAGCAGAAAATAGTGA
TTTTAACAAGTTTTT
(3075 bp)

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