SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16310c0_g5_i4
Scaffold_id
NCBI non-redundant
(nr)		ATP-binding_cassette_sub-family_A_ABCA1_[Heliothis_virescens]
Ontology
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0044267 P cellular protein metabolic process
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097232 C lamellar body membrane
GO:0097233 C alveolar lamellar body membrane
Transcript
Level		FPKM:7.49 TPM:7.34
ORF EntryO_TrvaFAMAMG19036_complete:A_TrvaFAMAMG_TR16310c0_g5_i4
Sequence
(Nucleotide)
GCTGACACTGTGTACTAGTTAGGATGTCGTTGACAGAGCCGCTGTGTACTAGTTAGGACA
TCGTTTGACAGAGACACTGCGCGGCGTCGAGCCTGTCGGGCGGACAGAAGCGCCGGCTGT
CGGCGGGCTGCGCGCTGTGCGGCAAGTCGCGCGTGGTGCTGCTGGACGAGCCCACGTCTG
GGCTGGACCCGGCGGCGCGTCGTGCGCTGTGGGACTTGTTGCAGCGCGAGAAGCGCGGGC
GCACAGTGCTGCTGACCACTCACTTCATGGACGAGGCGGACGTGCTCGCCGACCGCGTGG
CCGTGCTCGCGGCGGGTCGGCTCGCGTGTGTGGGCTCGCCTTACTTCCTCAAGCGCCACT
ACGGACTCGGGTACAAGCTCGCGCTCGTCAAGGATGCCAACTGCCAAGTCGATCTAGTCA
CTGAATTCTTCAAGACGTACATTCCCGATATAAAAGAGAACACAAATATAGGATCAGAAC
TAACATACATCTTGCCTCACGAACATGTTAGTAAATTTCCCGATATGTTCAAAGATTTGG
AAGACAAAAAAGACATTTTGAAAATATCTAGTTATGGTTTGTCATTGGCCAGCCTCGAAG
AAGTTTTTATGAAGTAATATCTACATTTAATTTTCTTTATACTTTAATTTGGTTGTAATA
TTCTAAAACTGAATGCTTATCCAGTTAATATTTACTTGCTGTTTTTTCAGAGCCGGTGCT
GAGTCTAATACAGAAAACGAAGGCATTAAAAATGAGAATCATGTCGTACCTTATAGTGAC
GATGTTAATGTATCCATTGAAGATCATAATTCCAGACACCTCGATTCACTGGAAAAAGTT
CGCGGCTTTAAACTACTCAATAATCACATAAAAGCTATGTTTTTAAAATTAGCATACAAC
ACGATGAGGAATAAACTAATTGCGTTCATACAGTTTGTAAGCCCGGTGATTAACATAATA
CTTTCAGTATTAATATCGAGATCTTGGAAGTTTCTTTCTCAACTACCCCCTCTAACACTA
AGCTTGGAAAGTGGATTCAAAGCTACCCAGACTCTACTATCGGAAGGTGCTAATGTAACG
GACGATAACTTCGAATCCAAAGCCATCAAGGCATACAAAAATTTCTTTAAACAATCTACT
TACCCTGACATGAGTTTGACTGATATTGGGACCATGGACATGGGAAAGTTTTATTTGAAA
TTGAGCGAGACAGACCTCTCTCGAGTAAAATACGAAACGTTGATTGGTGCTACATTTGAC
CGTAGCAAAATAACTGGGTGGTTCAGTAATTACGGATACCACGACTCTGCTATCTCGCTC
GCACTAGTGAATGACGCCATACTGCGCTCTCTTTCACCGGGAAGTTCATTGACAATCGTT
AATTATCCACTGCCTTACTCCATAGAAAACTTGGTGGAAGTAATGGCTACCGGAAGTAGT
ATGGGATTCCAGTTTGCCTTCAATATAGGATTTTGTATGGCTTTTGTAACTTCGTTTCTT
GTACTATTTTCTGTTAAAGAGCGTCGCAGCGGCGCCAAGCTCCTGCAGCGCGTGTCGGGC
GTGCGACCCGCCGTCATGTGGAGCAGCGCCCTCGTGTGGGACTGGCTGTGGCTGCTTCTC
ATATACTTGTGTATTGTCTTTACCCTCGCATGTTTTCACGAGAAAACACTGTCCACGCCT
CAAGAATTGGGTCGCGTGTTAGTTGTCCTCATGGTTTTTTCACTTGCAATAATACCAATC
CACTATGTGGCATCTTTCTTCTTTGATGCTGCGGCGACAGGGTTTTCAAAAATGTGTTTC
GTGAACGTATTTAGTGGTTGTATGCCATTTTTGATAACCGAAGTGTTGAGATTACCTCAA
GTGGGTAATCCTTTTTACGCACATCTTTTTGATTGGATATTTTCACCTCTACCAATTTAT
TGTATTAGCCGGAGTTTCAGAGACATGAGTGTGTCGTCATTTTCACTGTTGGCCTGCGAT
GGCCTTTGCGACCAATTACGTATTGAGAATTGTACACGACACACAATATGTAACCAGCTC
AACCTAACCGTGTGTTGTATTGAAGACAATCCCTTCATGAAATGGAGTGAACCAGGAATT
GGAAGATACTTGTTTACAATGTTCGCTGTTGGTACAATTACATTCACGGGACTACTCATA
AAAGAATATGAGCTACATAAAAAGGTTAAGTGTCTAGTCTCTCAAGATGAGAAGTCACTA
ATTAAAACGTCTACAGATGAACGAGTAGAGGATGAGGACGTATCAGCAGAACGAGATCGC
GTGACGTCACTGTCGAGCAGCGAGGTGTCGGCCCACAGCCTCGTGTGTCGCGAACTGAGC
AAGCGGTACCGCCGCCTCGTCGCCGTCGACAGACTCACATTCGCAGTACGCGGCGGAGAG
TGCTTCGGACTGCTCGGAGTCAACGGAGCCGGCAAGACCAGCACCTTCCGCATGCTGACC
GGCGACGCACGAGTCACTCACGGCGACGCGCTCGTGCACGGACACTCGGTGCGGACCCAA
GTACGGGACGTGCACCGCCTCATCGGTGAGTACACTAGCACAGTCCGCATGCTGACCGGC
GACGCACGAGTCACTCACGGCGACGCGCTCGTGCACGGACACTCGGTGCGGACCCAAGTA
CGGGACGTGCACCGCCTCATCGGTTACTGCCCACAGTTTGATGCTCTTTTCGATAATCTT
ACGGCCAGGGAAACACTAAAGATTTTCTGTTTATTGCGCGGAATACCACAAGATGTTGGC
GAAATACTTTCAGATCGACTTGCGGTTCAGCTAGGATTTATAAGACATTATGACAAAAAG
GTACATGAATGCAGTGGTGGCACCAAACGAAAAATAAGTACTGCCGTAGCTCTTTTGGGT
GCTTCTTCATTAATATTCCTTGATGAACCAACAACAGGAATGGACCCGGCATCGAAGCGT
CTAGTGTGGCGCGGCATCAGCAGCGCGGTGAGCGGCGGGCGCAGCGTGGTGCTGACGTCA
CACAGCATGGAGGAGTGCGAGGCGCTCTGCTCGCGACTCACCGTCATGGTCAACGGCACG
CTGCACTGTCTCGGCTCGCTGCAACATCTCAAAACTAAATTCTCACAGGGTTACACAATC
ATGGTGAAGTGTAAATCAGGCCCTGATCGCTACGTCGCTGTGAACGACGTACATCAATTT
ATGGTAAAACATTTTGTCGGCGCAAATCTTATTGAGACGTACCTGGGTATGAGTACGTTC
CACGTGTCGGCGGCGGGGTTGCCGTGGTGGCGCGTATTCAGTACACTTGAGACGGCGCGG
AACTCTCTGCCTATCGATGACTACTCGGTTGCACAAACTACACTCGAACAAGTCTTCCTT
GCGTTTACCAAACTTCAACGTCCTGCAGATTAAACCAAACCTAGATATTTGAAGTATAAC
AGTATTTTATATTAAGTGTATTAACTTTTTCGTTAGCTTTTAAGTGTGAGAACATACGAA
AATGTATTGTAAAGTGATGGTACAGGTATATGGGCAACACATTGTAGAGTAAGAAGTTGA
TTGAAATTATTATGAGAAAATAAGGGTCAAAACATTGTAAAAATATGATTATGTGCCTTG
ACGAAAGAATTAGCAAAGCAAATCTTTAAGATTTGAATTTACATTTGATACTAGTGTATA
TTCTTCTGTTTCAATATTATTAAGACAAAGTCTTAGATGATATTAAAATACTGCCCCAAA
AGTCAGCCTTACCTAAGTACATCTTTCTTTAAGTGTAAGCGAGATCCTAGACACGCTTAT
TTAATAATCTCACAAGAAACATTAATGAAGTATTTGAATTTACTTTGCATTTATCGTACC
GTACGTATCGTACTTAGATTATTTACTATCTATACCTAATAATATACAATTTGTATATT
(3899 bp)

- SilkBase 1999-2023 -