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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16308c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_telomere-associated_protein_RIF1-like_[Bombyx_mori]
Ontology
GO:0000781 C chromosome, telomeric region
GO:0001939 C female pronucleus
GO:0001940 C male pronucleus
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0019827 P stem cell population maintenance
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:0.93 TPM:0.91
ORF EntryO_TrvaFAMAMG19026_complete:A_TrvaFAMAMG_TR16308c0_g1_i2
Sequence
(Nucleotide)
AAAACAGGCCCGGTTTGTTGTTTTGGGGTTGTGAGCACAATAATTTATGAATTTAGAAAA
TAATACGTAAAATTTCAGATTAAGTATAAATATTATCGAAATATTATATCCATCTCTTGA
TGGATATTCAAAAATGCCAGACACAGATATAGATATCATAAATGAAACTATCGGCAACCT
CAAAGAATATTCTTCAGAAAATAGAATCAGAAGTTATGAAATTCTAGAAAAAGGTTTAAT
TGATGGCGTTAAAATATCACATGCTCACGTAAATGAGATATTGAACATTATTGTCGAAGA
TATTAAATATGCAACACCAACAAGTCTGAATATTATTTTGAAGATCCTAGAAAGAATTAA
GAATGGAGAGTTGCCTTACACGGAGGAGTTGACTACACTGTTACCATCAGCAGTTGCAAA
TTTAAATGTAATCAATAGCACAGTAATGTTTACTGGCAGGTTGGAGATCTTGAGGGAAAA
ATGCTTAGAAAATCTGTTGTTATTCCCTGAAGAGACCCTACGTAAACTTGCAATGTTCCA
TAGAAACAAAGTTATGGAGTTTTATGAATCATCTAAATTCTACAAAATTAGCATAGAATT
CAAAGTAATGTATTTGCAGTTTACCTTAAAGATCTTAAGAGCACTCCCCCAAAAAGAGAG
ACATGATTTTGTTGAGAAGGAAGTCACAGTCTGGTTGTCAAAAGGGATACCTACAGTAGT
TGTATATTTAAATCAAGTCAGTGGCACATCGGCTGTGAAATGTATTGAATTTCTAGAGGT
GGTGACGACTGAGTTACTGGCAATCAATTATGTCAGCGACCCTTATTGGGAGACTGTGTT
TCAAAATATCTCTAATCCTAATAAGTATCCACTTATTATGAAGAAACTGCTAGAAAGTGG
AAGTTCACTATGGCACAGGCTATGGATTGTTTGTATTAAGCTTCTCGATCATCAAGTGAC
ACGTAACAACAGCGGCTTAGGGACACCGATTAACTCAATGCTGCCTGTTGTTGAAGCTGC
ATTCAAAATTGACGCTAAAAATCGATGTAGGGCATTTGAATGCTGGACAGTATTAATAGA
CATATTTGCCAAAGAAACAAATGACAACTGCATAAACAAACGACTGAAACTACTTGTTAT
ACCATTGAGGTTGAATAATGCAAAAGTGGAAGAAACCGCTATATCCAAGTTTGGAGCTTG
GTGGCACTTGATCATGAAATTTAGCACAAGACTTGGCATGTTTACCGATTTAGTGCTGAT
CTCGTTTTTGCACTTTTGTTTCGGTAAACACAATGCCAGCAAACCTACATTTGTTCCTGG
TCAGATATGTGATAAATTGTCAATGAAATGCATAGAAGGTTTCATAGAGATTGTTGGGCA
TGTAGCTTGTGAAGGATGCACAAATTTACCAAGATTAAAAGAGAGGTTACTATGTAAGAA
ATATTTAATTGAATACTGGAATGATTGGTCACACTCCATGGAAACTGCAATCAATTTGCT
TATCAAAAAGGGAGGGGAGAATTCTCAAAAGCAAATTTCCTGTATTTGGAAATCGTTTTT
ACTAACAGTTGGAGATTTGCCTGATAACAGCATAAGAAAAGACCTCATTACTGAACTATT
GAAAATATTGGAACATTTTGTTGAGGAAGGCAAAAGTAATAGTCAAAATGCTGAAGTTGT
ATTCAACTCATTAATTATTACATTGTTTGATGAAGAAACAAAGATAAAACAGTTATTAAA
ATCTCAAATTGAAGATGATGGTGTACTACACAATGTTATTAGACTTCTGGTGGATCCTCT
ATTTAATTCAGTATATAAATACAATAATACTTCAGCAATCATAGGAAAACTTAAACCCAT
AGCTAATTTCATAATAGCCGAGTCCTTGAACTCTGAGACACATATCTTAAAGTGGATTTT
GGATAACCTGCCATCGAATGACAACACCCTTAAGTTTTGGACGGCTCTAGCTGAATTGTT
GAGTGAATCTGGTTTTAGTATATGCGTCAACAGTTTATGTTATATGCTCATATGGCCATT
GAAATCAATGAACCAGTTTAATGACATAAAATATTCTGCTAAAACTTGGGTAATGCTCTA
CAATGTAATGTTAACAAAGTTGATGAAGACTGATATTCATGAACTAATATCGAATATATT
ACTACATTCCACTGTAGTCACACACACAAGCACATACATGGCATTGTCTGCTCTATTATC
AATCCTTAGGAATGGGGTTAAGAAACATGCAGATGACAAATACGAGAAGCAAGTAGAACT
ATTACAAGTTCTGATTAACAGAATCGACAATTACGAGGACATTGAAGATATATTTCCTGT
ACTTGTTGATACTATTGTCGTCATTTGTAATGTTTTGTCGGAAACTAAAAACGAGGTATT
GGAGGAGCATACAATGATGTGTGTCAAAAAAACAATGATATTAGTGTATCCTGTACTCAA
AGATAAAGACAGTGCACAAAATACCAGACAAATATTAATTGAAAATTTACTGAAATCAGT
TTATTCCGTACTTAAAACAACTTTACACCCAAAATCTTACAATATTTTATCTGATATTTT
AAATCTATATGCTACAAACTTTAAGGACAGAGCATCATTATATGAATCTATCGATTTTAT
TTTGAAATTAAATTCATCACAAGATAAAGAAAACAGTCCACATGACATCAATAATGATTT
AGAAATATGTGAAAAACCAAGCCAGATAAGTAATGAAAAAACCAAAAAGTTTTCGACCCC
TAACACCAAAGAAGTTTCTAAGAAAAAGAAAAAAGAAACGAGTATAGTAAACACAGTTGT
TGAAAATGGCGAGGAATTTGTAGTTGTTAAATCTAATTGGAAATTCAACCCAAAGAAACT
TACAGAAAATCAAAAGGAAAAGTTCACAAGAAAGAGAGAGGACATCCCTGCTCTATATCA
AGATTTATCACAATCCCAAGATGAATTTAAAATGACAAAATGGAAAACAGATTCACAGGA
CAGTTCGACAACCAGTAAATCGACTAGCGTATCTGTAAACAATTCTAATACGGGAATTAA
TCTTAAAGAGATGCCGGGAACTGATGTTGTTCCTAATATTATAGAAAATATTCTTGCAGA
TAAAACTGTAGCAGTTTCTGAACCAAGCTCAGAAACAAGCCCAAAAGTAGTTGTTAATAC
TAATAAGGATAAAAAATCTGAAACACCGAAACCAAGAACACCTCGAATGGCATTAAAAGA
CCGAGTTTTTCGAAACGTTAGAAATTTAATAGAAAAATCAACGACAAAAACACCTGAAAA
AGAAATCAACACAACTGAAGCTAGAAACTCTGAAAGTCTAGTTAAAACACCCGTTTCAAA
AGAAGTACACACTGAAAATGGTGTGAATTCTGCTCCTCCTATGTTATTAGCTGATAGGCC
GTCGCGCGTTAAAAGATTACCTAAAAAATTTGACGGTGCAGAACTTTTTGCTATGAAAAA
ACGATGTCAATCTCAGACAGATTTATCATCAAACGATCAGGTTGTGGAGAAATCCAAAAC
AAATACACAATCATTGACGAAGAAAAGTGTGTTACCTGAACCAGAGAATATTAAAGTTGT
AGAGAATAAAGTTCCTGACGAACCGATGATAGTAGACAACATTGATATTCCTACTGTAAT
CAATGATGATAACAACAAAAAGGAACAGATAGTAATTAAAGAAATTGAACCCACTATTTC
AGCAGAAGCGCCTACGATAACGCAAGAAAAGAATACAGATATAGTTAGCAAACAGATTGA
AGCTTCAAAAAATGTAGAAGTAATTGAAAACACAAATTCTGAAATTGTCAATTCGGCTTT
AAGTTCGCAAGAGTCGATAAATGAGGAGACATCTACTATTGTTACTCATGTTGTACAAGT
TCATTCTACAGAAGACTCTACTCCGAAGAGTAAAGAAAATTCTATCAAAAAGAGCACTAA
AAAGAAATCACGAATAGAAAAAGAATTAGCCATCGACATGGTGGAAGGACATCCTTTCCT
TAATACACCTACGACGACCCAGAAAAGATCTACTCGTAAAAGCCTTGCTACTCCAAATAC
AAAAAGAACCTCTTTATCAGAAAAAATCAATAAAACGAAAAATACAAAGAAGAAAGATAG
TTTGGAAACAAAACAAACAGATCCTGCATTGGAAAAAGATGATGTGGAAACTAACAGTGA
TTCACAAACGGATCAATCTCAGAGCTGTTCGGAAGATGTTATTGAAAGTTCACAAGATTC
AACTATAACAACGATTAGTATCTCAACTAAAACTCCTAAAAAGATACCAATAGTTGCTTT
GAAAAAAATTAATGTAGTCTCTAACAAGAACGACAATATTAGTGAAACACAAAACTTGCT
AAAAGACCAAGATGTTGAAATGTTTGAAGACTCTGAAGAGAAAGCAAATTTAAATAAAAA
CGTTGAAAATCACGAAAAAAGTTCTGATAAAGCTGATTCGCCTAAAGATAAACTTACTGC
AAAACCAATATCGCCCTCACCAGTAGAAGTTTCACAATCTATAATTTTCATAAACGAAAC
ATCCTCATGTAATGAAAACAAAGATTTGGAATTATCTGTTAATAAAACTGCAGAAGAAAC
GAATGTTGAATCAACTGAAAGTATGGATACTGAGCCTCTGGCTAATATCGACGAATCAGA
TGTAATTTTAATAAATGATGACGAACCTCCAATCGTGGTTAGTAGCGAAGAAAAAACTGT
TGAAATCGAGAGCCAACAATTAGCCGAAGCAGATACACAACCCATTGATCAAAATGAAAA
ATTAAATTCTATTTTGAATATAGAAGAGTCGACGGCCGATGAGATTATTGTCAACAATGA
GTCCGTGATAGCCACTCAAGACGATGTTACTAAAACATTAACAGAATCAATGGACGTCTC
AGAAGCTGTTGAGACAAATGACGTGTCTTCTCCTTATAAAAATGACGAGCAAAGAAAAAA
GGACTTTTTGAATAACACCATTGAGATTTCACCTATCAAAACCTTAAGTCCCGATCGCGA
AGACAAATCACCTTCGCCAGAAACAAGTAGTGATTACGTCGTAATAAAGTTGACTTCGCC
AGTTCATAGTAATGGTGAACCTTTCGAGAAGGGATCTCCAGAGTTTTTCACCGAAGAAAA
AGTGTCTCCCGATAAAAGAGATCAATCTCCTCCAAGGACTGAAACAGTTGTTGTTAATAC
AAGTCCTAGTTCACTACAATCGCTTAAAAAGAATAAGCCTCAAGTGCGTACGGGTGGACG
GGCGGCGCAAATGCTTGGTTTATGTGTTCCCGATAAATTAAATTCAATGATGAAAGATAA
ATCAGATTATGAAGAAAATAAGAAGAGTAGTCCAATGACTACACCAGCCCGAAGAAATCT
TAGAATGCTGTATAACTCTGTTACTGATAGTTCAGAAACAGGGAATGAAAGTGAGGACAG
TGAATCATTCCTTAAATTTAAACGTACACTGCCAGCATTAGACGTTAGTCCATCAGTTCC
TATTCTCAAAAGGAAGTTGGCTGAGATTTCTGACGACACTACAGTTTCTCCAGCAACTAA
AAGAAAACGAGTAAGTTTCCACGATCCGCCTGTATCGACAACAGTTTCCGTACAAAAATA
CATAGAACCTCTAGGTCTTAGATCACCACAAAATTCCGCACAAAAACGTCAAGAGCGACA
AACGCGATCCAGTTCCAATTACAAATCGCAAAAGAGACTCGACCACGCTTTTAAATTAGA
TACGGCATTGTCAAAAGCGGTCGAGAGTTTTACAGATGTTGAAATACTAAGTAATAGTGA
CACTACACCTGGTATTGGAACTCCTCCAGAAGGCATATCTAATCCAACTGAAATTATCGG
TGGCATTCAACCTCTAAAATCTATAGAGGCTAATACTGAAAAACTTCCAACAATAACTAA
TACTGATAGTGACATTGTCAGTAAGGACGATACTCTTACATCCCTAGAACAAACTCCTGT
AGTAGAAGTTGTAAATATTAGTGAATTGAACGACAAAGATCCTATTTGCGCTGAATTATT
GGACTGCAACGATCCCATTGACAATGTGGCAGCCGACCTGTCTTCCACTGCAATGAAATC
TTTACTAATAAAAGAGCTACAAGGTAAAATAACAACGATTGGTGATTTAGCTAAACTGAC
AGAATTGGAAGTGAATCGATTATGTATAAAGGCGCCTAAAGTGAAAACGGTTAAAAAGGT
ATTAGGCGACTATGCTACTAAAGTAGCTTCAATGAAAACTTTAGTTGAGAATCCTAAAGC
AATTGACGAACCTCTACAAGTATTTATGGATGTTGAAACTCAAACAACGACTATTTTGAA
TGATGCTGAAGTTCAAACTAGTAACGCGATGACGTCATCGTCGTCTATGCAAACGGAAAC
GGCTGTGACGTCACATGCTGCAGTACAAACCAAAGAATCAGGATACAAATCGACTACTGA
CGTAATTGCATCATGTTTGAAAGAGAGATTTGACTTTGTGGAGCAACTATCGAATCAACT
GGACGTACCTGCCATACAAACACTTTCAGAAAAGATGTCCACTTCCGACCTAATATCTAC
ATTGAACACAAAAATAACCGACGAAAATACACACGATGTATTAAACAAAGTTCTAGATCA
TTCGAGCGATAAAAATAAAATCAAGGAACTTGCTATTTTGGGTGACTATATATGTAAAAA
GTTCGATTCTAAAGATTTAGTATTGTTTTGTAGTGAGATGCTTCGAAAAGTTTACGATAA
GCCAAATTAGTGTTAATTACATTTTTTACTTTATGAAAAATATCATGTTTGTTAATCATC
TGTTTTGATTAAAACTAAGTGTTTTTAACTTGTTAACCAATTTTGAACAAAAAACAGGGT
TTGAAATTCTTGTACAAATGTTGATTCTAAAGTAGTTATTCAGTTTACGTAATTGAAAGT
TTTGTTTTGTCTACAGGGTGATTTGTTAGACAGGGTACATATTGCAGGAGGGTGATG
(7017 bp)

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