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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16295c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_tRNA_pseudouridine_synthase_2_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:0.96 TPM:0.94
ORF EntryO_TrvaFAMAMG18935_complete:A_TrvaFAMAMG_TR16295c0_g3_i1
Sequence
(Nucleotide)
TTTTAAATAGACTAGTTTCAAAAATAATAACAGAAAATAAAGAATGAAATTTCGAACTGG
AGCGTTGGCATATAAAACTTTAAACGGTTTGATTTGTGTTTACAAACCACCGTGTGTCTC
TTTAAGACGAGTGCAAAATACTATCAAAACAAATCTATGCAGAGATTTAAACGCATTGCC
CGATGATCCACAAGAGAAAAGAGTAGAAATTGTAGGGGCTACAAACGAGCCAATGAAGAT
ACGTTTGGTTCCCAACTATGCTGACAGCCCCTTAGCCTGCGGTCCGAGGTTCATCAATGA
AGACATTCGGTGCAGTTGGGCTACTCACTTAGGTTTATTTACGAGCGGAATATTGTTGTT
AGGTATCAACGAAGGCACAAAACTAACCTACTTAATAAACACATCAAGACCTACCAGAGC
ATACAAAGTTCATGGCCAACTTGGCAAAGCTACGGACACATACTTCTGGAATGGTAAAAC
AGTTGAGCGTTCATCGTATAAACACGTATGCAGGGAGAAAATAGACGGAGTCGTGGCAAA
CATGCAGGCGGCTCATCAGAAGGCTATGTATGAATTATCAGGTGTACACATGGATTCTCA
GACGATGTATGATCTCGCAGTACAGGGCCCAATCAGACCGGCCAGCACCAAAATACCAGT
TCTCTATGGAATTAAATGTGTACATTTTGATTCACCTAACTTTACTTTAGAGATCCAATC
AATAAATGAATATGAGAGATATCTCTGGACCCTGGTCCACGATCTCGGAGTACAGCTGAA
GACGTCAGCTTACTGCACCGGAGTACAATGTATCAGACAAGGGAAGTTTGACCTCGAACA
TGCATTGCTGAGGAAACATTGGCAACTAGAACACATAGTCAACAACATGAATACTTGTAG
AGAGATCTTGGAAGAAAATGAAAACTTATTAAGACCAGATTCAGCAATATTGAGCTTGTA
GAGAAAATTAATTGGTGCCTTATTTTCTACTGTAAATTGGATTGTGTTGTGCCAAACCAT
ACCAATCCACGTCGACCTCTTTCCGAGATATTTAAGTTTTAAGTTTGACATATTCATAAT
GTGGGTTGGTTTCAGACATCCTTAGTTTTTTTGATTAAACTTTGGTTCTACATGTCAGAT
TGAAATCAAACTTACCGACATGATGAT
(1167 bp)

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