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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16290c6_g8_i3
Scaffold_id
NCBI non-redundant
(nr)		broad_complex_isoform_7_[Helicoverpa_armigera]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
Transcript
Level		FPKM:14.72 TPM:14.43
ORF EntryO_TrvaFAMAMG18918_complete:A_TrvaFAMAMG_TR16290c6_g8_i3
Sequence
(Nucleotide)
GCATTTTTGTGCATTTTCTAAAATAATAACTCGGTGTTGATTAAGATTTACAATAAATAA
ATGTTATACAAAAATATGTAATTTACGTTATACAGCAGAATTTTCGAAATCATAAGAATG
GCCGACCAATTTTGTTTACGCTGGAATAATTTTCAATCGAATATCGTTAGTGCATTGGAT
TCGTTGAAATGTTCTGAAGATTTAGTGGATGTGACGCTTACTTGTGAAGGCAGAAACATC
AAGGCCCACAAAGTCATTTTGTCAGCGTGCAGTCCGTACTTCAGGAATGTGTTCAAGGAA
AATCCATGCCAACATCCTGTCATTATTTTAAAAGATGTATCTGCCGATGACATTGTCAGT
TTATTATCATACATGTACCAAGGTGAGGTTTTCATAGAAGAGAGTAAACTGTCTTCTTTT
CTACACACTGCTGCATTATTGCAAGTCAAAGGACTAACAGGAGTGACTCAGCAGAAAGAT
AACTTTACATCACCAAACACATCAAACAAATTGTACACACAGCTGACAATATCATCAAGA
ACACATCACAATGCACATAAAGAAATAAAACTTCCTGCGTTAAAAAAACGTAGAAGCAGC
ACTTCGGATAAACCAAACGATATATCTGTAGGTGATGGGTATAAAAAGAGTAAAGTCCTT
GATACATGTGATATTCCTAGATTAAACAATTTCTCTCAATCTTCCAAAATTGACAATTCC
TGTGTTCCTGTTGAAAACAATATTGAAAAGAAGTGTGACGGCAAAAATGAAACTTCACTG
ATTACTGCTAATGGAAAAAGTTCATCATCTCAGGCCCATGATGTAGTCCCTATGAAAACT
GAAGTTATTGATGATAATTCTGGTGAATCTGCAGCTGCTTTATCTGAACAAGATGACAGT
CTTCCAGATTATGAAAACAGCATGCTTGCACGATCTTTGTTATCAGGAATCAACCCTTCA
AAAAGTGACAGTGTTAATAACATGTCAGTAAAAAAGCCAGTGAATGAAACAGGACAAACT
AGACCAAAAGATTCAAACACTGAAAATGCTCAGTACAACAACCTGTCTCGAAGCCCAATC
AAAACTACTGATGACATACAAGTGAAACCAGAAAGACAATCTCCAAAATCAGATGTTGAG
TATGAACCAGAAGTACTCCTGTCTGAACATCAAGACAGTGGAGATAATGAGACATACTCT
CAGGAACAATCACAGGCTTTATTACTACTGGCAGGAATGTCCACTGTACCAGGCATGGGA
GGAGGAGCCTCCACATCACAGATCATGTCACATCAACAATCAAACCATGCAGCCATCTGC
GGTGACTGCCCGCACTGTGGAATGAAGTATTCTAATCAGTCTGCACTCAAATACCACGTA
AGGTTAATGCATTCAGATTTGACAAACAGATTGTGTTGCTATTTATGTCCAAGGTCGTTC
ACGATGCGAGAAACTTTCAAGGAGCATATGTGGTCGACTCACGGTCAGAGAAACTAATAT
CATAAATAATTATGGTCTTATGTACGTGCCTTAGCCAGAGTCCCTTGTCAATTAGGACAA
GCTAGTGTGTAAGTGAACTGTTTTATAAAATTTTGTGCCTTGTTATAAATGTGTCTTGAT
TGTTGTCAATTTTATTAAAGCATTTTATGCTGTATATGCAACATCATCTTTGGACTAAAA
TTGATTACATAAACGAAGCTGACACTAGTTTCAAACTGCACATAATTACAAACATTAGAA
ATGTGCCTTACCTACTGCTGTTCATCTATGTGGTTGAAAAAATATTGAATTTACAATTTT
ACGTTGTGAACTAACTTGGCCTCTCAGTAGTCAACAATATTGTATATGTATTTTAAAATG
TTTCAATTAAATTGATGTTAGCAGAGACTGATCAAAACTGGTAGAGTTGAAATTTTGTAA
AATGTTATCAAGTGAATACATTGGTTTTATGAAATATTTACATGGTCTGTAAATATTGGT
GTGATCTTCCTTGAGTTCAAATTGGTGCGAAATTAATATTTAAATTGGTGCTAGTACAAT
TGGTGTTCTCAGTTCCAACAGTTTCATAGAGTGTATCCTGCAGTACATCTTAGTAAAGGG
AAATTTCTAGTTTCCTTAGAAATAACATCGTTATTTATATATTGTTATACATATATAGTT
TATTGAATAGTTAGATTTAGATTAAGAAATAATGTGTCTATTATTTTATATTCAAGTGTC
AATTTGTTCCTAGTTCAAGTTTTGATGTTACTGGTTTATAACACTAATTAATTTGAGAAT
ATTAATAATTTATATTTAGCACTTTCAATTTAAATCACTTTTATTGTCAATGCAAATAAC
ATTTTATTTACTATAAAAGTATTTTTGTGGATTTCATTGATGCATTTCGCATCTTACAAA
TTTTCTTAGTGTAAAAGCAAAAAAAATACGTCAAATGTGTAGACGAGACTAAAATTTATT
ATGAACCCGGCCGAACATTATTAGAAATACGTTATCTTTTGAATCAATAACAAGAAATAT
TAATGAGAGCATTTTACTCTTGGTTCATTAGCCATTTGGGATGGATTGTAATTTAATATT
GCTCTATGAAAATTCATTGGAAATCTGTGCGAAATTAGATAATATGAAATCAACAGAAAA
TCGTGTTCGCGCTAACGTGGCCTATTGTTTGCTCTAAAAGTCTCTAGCTGCTAGGGATGT
AACGAATATTTGCATTCGCATTCGCGAATATGCGCACGTTTTTGAATATTCGCATTCGCA
AAAATTCATGCGAATGTTTTGACAAAAGTTGAGTGGATGTTGTGCAGATGTAGAGGGAAT
CTAATAGAGCCAAAATGAAGGCCTCTACTTGCCCTTTAAAATGACCCCAAACTGGATGAG
TCTACGACCTCCCGTTCTCAAGATAATTTGCGGGGAAGTTCCAATTATATAGGTGGGGGG
GAGAAAATTACCCCTCTCTTCCTAGTAGATTTAGTATAGGTAAAATAAAGGTACCCATTT
TATAGTAATCGCATATTATAGTGATTCTAGAAAATTATTCTGATTTGTCTATAAAAAATC
GACATTCGCAACTTCCCTAGTACAGCAGCCTAGCCTAGCAGCTACTAGCTGCGTGAACGT
AGATGTGAGTGTAGTAAGTAGAATCAGCCTCAATAGTGCATATCCGTCATAAAAGCGAAA
TTCGCTTGAATGATCGACGCAACGACTCAAGTGATTAGTGAATGTTTGCTATTGAAAAAG
GTAATGAGTGCAAATTGCGTTCTTGCGATACGGATTTGAAAATGAGCATGCATTAGTGAG
GCTGACAGTAGTAGGTACTACCTAGGATGATACGATCATTAAATTATCAAAAGTGTTGGT
TTATATTATCATCCGTAGTGTATATTATTTTCAGTATCGCTGAGTGTAAACATTACAAAT
CATTTAAACATTACAAATGAAAGTGAACAGTGCAGATTTAAAAAATGCTGCCTTCAGACT
AAATGTTTTCTTGGTAATATGTGCCAAACAATTTTTCAATTAATATTGCAACGTTGGCAC
GACGAATATTGTTTTAAGTTACCGGTAGTGATCTAGTAGATTACCTAAAATAGGATCCTT
AAATTAAGTTAGTTTCAAAAGTTTTATTTAATTTTGTTATCTCAAAAACTTGTCCTTAGG
ATAATTCAGTTGACTCGATTAGCCCAATATATCGAATGCCATTAGTGAAAATTTGTTAAT
TATTGATTAGAGTTTAAGACAAATGATGAAGTACATTATATTGTATATCGTGTACCCTAG
TTAATATATTGATAGTTTTAATGGAGATATTATTTACATTATTGTAGTATTGTTGAATAT
TTTATTCAGAATTTTACAAGATTTATATTATTATGTTATGATTAAAGATTTTATGCTTCT
TAAAAAAAAAAAAAAAAAAAAAAAACACGTTTCATTCTCCTCCTCCTCCGGTTCAGAGTG
GACTGGAGAGCACGATTTATCTGATCCTCTTGACCTGATTGAGAAAAGTTGCGAGGATAT
AGAGGAAATCAGAGCCACATTAAAGGCTTCATCCTAACTTTCAAATAAGCCATTACTCAA
TGGGTCCATGATCTTCTGTATTAGAGATAATATGGAGGATTTCAATTGTTTGGTGCGGTA
CCTCCTCTCTTGTTACTAGATTTGGTGTAAAACATAGAGATCTAGCAGACTTGAATACGA
TTTTTCTTTCAAATCAATTCATG
(4223 bp)

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