SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16284c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DDB1-_and_CUL4-associated_factor_13_[Papilio_machaon]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016567 P protein ubiquitination
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
Transcript
Level		FPKM:7.66 TPM:7.50
ORF EntryO_TrvaFAMAMG18860_complete:A_TrvaFAMAMG_TR16284c0_g1_i1
Sequence
(Nucleotide)
TTCCTTTTTTTTTTCCACAATTTATTATATTTATTCATCTTCTTTAACGACACGCTTCTT
TTTCTCAGAAACATGTGGTACAGCTCCCTTTTTACTGTGAGCACGTCTATTGGCTTCTTT
TCTCTTTGTTTTCTCACGAATAGTCCGAAGCTCCTTTTGAGCATTCAATATGTGTTTAGG
AACATGCCTGTGTCGAGCAATGCGTTTGACTTGAGGATGGGCAGCAAACTTATCTTTAAG
AGCTTCAGCATAATTCAAGGCTTGTCTTTCACGAGGTTTCAGTACACCAAGCTTTTCAGA
TGCTCGGGCCTTCCACATTCTTATGTTCATTTCATCAGACCCAGTTAATATATATTTGTT
ATCAAGAGACCATTTCACACATGTTAACCTCTGCATTCTCTTAGTATGATACACATCCCT
TGAGTGTCCTTTATCGCTCTGGTATATTCTAACTGTTTTGTCATAGCTACCAGCAACAAA
TTCACGACCAGTTGGTGCATAGTCAACATCAATAACAGCAGAAGTGTGGTCCATGTGGAT
GGTTACTGGTTCTCTTAATCTTCTCATATCAAATGTGTATAAATTGTAATCTTCATTAGC
TACAGTAAAAATAAATGCTTCCATAGGATTCCAAGAAAGGGCATTGGACCTCAATTCTAG
CACAACTTTTCTGAGAGGTCCAGATTCACGACAGTCATATAATATAATACTCCTGTCACT
GGCACAAGATGCTAGTATATTATGTTCAATCTGATTGAAAGCTACATGATGTAAACTATC
GACACCCCATTTAAAAACTTTAATTGGTTCATTTCTTGTGTTCTCCCATAACTGGCATTG
TTCACCACATGTTGCAAAGATTGGTTTGTTCCTGTGATGTGTTATACCAGATACTACAGA
CATACTTAGCAATGTGTTAGTTGGTTCTTCATCTTCTTCATTTTGTGCTTGTGCTTTCCA
GGTTTTAATAGTTTTGTCATCACCAACACTAGTGAAGTGATTTCCATCTGGATTGTAGCA
TAGTGCTCTAACCCAGCCTTCATGTGCTGTAAAATTCCTTGTGCATTTTCTTGCAGCTAA
ATCCCAAACACGTATTTCGCCATCGAACGCTCCACTGGCAAGTACAGCCAGTCTACTAGG
ATGTTTGGCCATGCTAGATATGCCATCTTTATGCCCATCCAAACAACCAATAAAAGGTTT
GGCAAACACCCTCTCTAATTTCACAGCATTCAAGGCACGCACATATTCACGAGGTGCCTC
CATAGGATGCAGACTGGGGTCATAATTACGAGGAATTTTTTGGATATCTCTTTTTGTAGC
ACGTAAATAATCTTCGGGATTGCGACTTATAACTTTAATCTTTACGTTAGACATATTGAT
ATTCTTTATTATGTCTTTAATATAAACACATGTACTCGGTCTAAAAAGATAATTATTTTT
CTTCAATAAAAGTTGAACTTAATAACACTAACATCTGAAAGTTGAAAAATTGTATTTTTA
TTCTATTTATTAATCTACAAAGTATAAATGCATTGAAGTTTCA
(1543 bp)

- SilkBase 1999-2023 -