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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16280c1_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like,_partial_[Neodiprion_lecontei]
Ontology
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:0.50 TPM:0.49
ORF EntryO_TrvaFAMAMG18836_3prime_partial:A_TrvaFAMAMG_TR16280c1_g1_i2
Sequence
(Nucleotide)
AACCGAGGACGCAGGCGATATCAAATACTTAAGAGCTATGTCGGAAAGGACTGGGGTAAA
ATGACGACAGTCAAACCAGAATTTTGTAGGATTCTCTTTTCTGGGTATTATTGGCTGATC
TAGATATTGCTTTAGTTCGCTAGGCATACCATCACTGGTTGAAAGTAAACTGGAGTTTGC
TGAAGCTGCAGCAATATCTATCAAAATTTTTTCATGTCCGGACCACAGCGACGGCGAAGA
ATTTTCTGAATTTGGAATTATGGTAGTGGCAGTGGGTCTGAGTTCAGGCGAAAGTTGTCC
TCTACGTCTATGTTCTAAACGTATTTCTTTTGACAATGCGGTTATTGCAGTGGAAACAGC
TAGTGCTGAATTAAAATGAATATGCTTAAAGCGAGGGTCTAAAATTGTTGCTATAGCAAG
ATGTAAATGTCGCTCTAGTGGTTCTAGTTTGGCAACAACTAAGTTTAGCAAACTCTTCTG
AACAGCAACACCAAGTTCGGTGAAAGGTTTTACTTGTTCAAGTCCTTTCTGAAGTAAGTT
TGCAATAGGAATCGCCAAACTAGAAGTCACATACTGATCCCCGCTAATGTCTTCAGTAGC
TTGCTTAAATGGGGTAAGCAATGTTATCAGATCTCGTATGACACTTAGCTCTGAAGAAGT
TATCATATCAGGTGCGTTCCTGATACATTCTTCGTGCTGTCAATGTCACCATCTCATGTG
AAGGAATGCAGTTATTAGCTGTGTTAAGAAAATGCGCTGTCACCACGATGAAACTTCGTG
TCGAGTTGGTAAGAGTTAATATATCACTTGTTAAAGCAATATTATTTATCTCACTTAATT
TTTGTTTTAAAATGGTTTTGGTAGTGACATATCGTTTTTCCATGAGACCAGTTATCTGG
(899 bp)

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