SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16279c1_g3_i8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transient_receptor_potential_cation_channel_trpm_isoform_X1_[Bombyx_mori]
Ontology
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007005 P mitochondrion organization
GO:0010960 P magnesium ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0043052 P thermotaxis
GO:0046873 F metal ion transmembrane transporter activity
GO:0051262 P protein tetramerization
GO:0055069 P zinc ion homeostasis
GO:0055085 P transmembrane transport
GO:0070838 P metal ion transport
GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:1.93 TPM:1.89
ORF EntryO_TrvaFAMAMG18783_complete:A_TrvaFAMAMG_TR16279c1_g3_i8
Sequence
(Nucleotide)
ATTTGAGCTATGTAGATAATTCGAAGAAGATAGGAGTTCTGCTGTAGTTGTTGTATTCCG
TTCGTTCACTTTTTTAGTTTTGTTATATCACGATTTGATGCGAGACGTCTTTTTTAGGTT
TTTCTTAGTTTTATTTTTTTAGTTTACTATTTTTTTCTTTTAAGTTCTCTTCCTCAATAT
TATTTTTAGGTATTCTACCAACCGTACTTCATGTTGTACGGTGAAGTTTTCGCACCGGAT
ATAGATCCTCCGTGCGGGAAGGAGATAGGCGACCGGAAGTGCGTCACCGGAAGATGGATC
ACGCCGATCGCCATGACGGTGTACCTACTGATCGCCAATATATTGTTAATAAACCTCTTA
ATTGCCGTTTTCAATAATATATTCAATGAAGTCAATGAAGTCTCGCATCAGGTATGGATG
TTCCAAAGGTTCACAGTGGTGATGGAATACGAACAAAAACCAGTACTGCCGCCCCCACTT
ATAATCTTCTGCCACATCTACGCGGTCGGCAAGTGGGTCACCAGGAATGTCTCCCACAAG
AGGTTCCAATACGACAATGGTCTGAAGCTGTTCCTGGAGAAGGAGGATATGGAACGGCTT
TATGACTTCGAAGAGGAGTGTGTTGAAGGGTATTTTAGGGAACAAGAAGTTAAATTGTCA
AATTCTATAGAAGAGAGAGTAAGGAATACAACGGATAGAGTAGAACATATCACGACCAAA
ATGGAAGATTTAAATCAAAAAGCTAACTGCCAAATACAATCAATGCAAAGCGTAGAATTT
AGGTTAAGAAAGCTAGAAGACATAGCGGAACAGACTATGAGTCATCTCGCCGTAATACAT
CGGTTCATGGCGACTCATCCCTCCCTCGTCAATCGAGGCTCAACTGACACCCTGGGACCT
CCTCCTCCGACCTTCCAGGCTGGTGGAAACAGACTCAGGACTGCTAGTGACCGGTCTGAG
GTGCTGTCGGACAGTGACACGGGCGCGGCTCGCTTCGCTGTGCGCCCCGTACAGGAGGAG
GACGAGCAACAATACCCCTCCGACGACGAGCAGCCCCATTCAGGCCCCGAGGCCATATGT
GGCGAACCGAAAGAGCCCGAAGCTGATTCAATGTCAACATCCTCTGGGGGCAGTGCCGCC
GGACCTGATGTCACTGTGGTCAGACAACAACCGGCTATCATGCCAGCTAGACAACGGTCC
TCAGATAGTAACAGGACTGAACCTAGCGACGAGAAGAAAGTGGCATCATCAACAGACGAT
GCCTTCCTCCCCGAAGTCAGGGAGATGCCGGCTGACCTGCACAGTCTGAGACCACGGACC
ACCTCGGGAGGAACCAGGAGGACTGCTAATACTAGACGGCGTTCAGAAGGCGGCAACGAT
TGCGGCATGGGCCCTTATTCGACTCAGCACTTGGCCCCAAGGAGACAACACAGCCAAACG
CACTCCGAACCGGACAACTCGGCCGTCGACGCTGGTTCTGTACACAATTCTGTTACTGGT
CCGACCTCCGGTTGGGAGGCGACAGGAGGCGCCGCAGGAGTATCATCAGGTCGAACAAGA
GTAGGAGGTGCTCCTCGATCACTGTTACTGGCCATGCACGAGTACACCAGCATCACTGAT
GAACTGGAAACTGTGTATGGACTGTTCTCACCGCCACATACACCCAGGACCCCCATAACA
TCCCGTCTCCTCTCCCCCGCCCGGGCAGCCTCCCCCTCCGTCCGTCGTCGCCACGCCAGC
GAGATGTCCAACCCGGAGTTCGCGCTCTTCATGGAGAAGGAGCATCTCCGAGGAGCCGAG
GAGGATGATTACATCATCATGGAGAACTTGATCCAGAGGCGCGTAGAAATGGGGTCTGTG
ATGGACAGATACGAGGAGGAGGAGAATGGGGAGCAGGAGGTCGCGGGCAACATCAGCATC
AGCGTCTGCATCAACACCAGCGACCAGCCGGGGCAGAGCGCGGGCCTGCTCACCGTGGAC
AGGCGACTGCCGCACCAGAGGCACTCCCTGAGGAGATCATCAGCTATCGACAGTCGGGAG
CTACCATCACCCCTGCAACCGTTGCTCGGAGACGACGCATGCGGAGAAGTCTTACTGCCC
GTACCTAGGCAGCCCTCTGGCGATACAAACGCATCAAGTGACATATCTCTATCGCACATG
GTGAGCGAGAACCTCCCCCCTCGCCCCTCCATAGTGCTGGACTCGTCTCAGTTGCCGCGA
CAACGATCCGCCGAACAACAGCAGCCGCAGTGCCCGGGACCCTCGCGACCTGAGACCATG
TGCTGAGGTATGGACAAACAGACATACAGACACACACAGACACAAGCACATACACAGACA
AACATACAGACATGGTGAGAGAGAACTTCCCCCCTCGCCCCTCCATAGTGCTGGACTCGT
CTCAGTTGCCGCGACAACGATCCGCCGAACAACAGCAGCCGCAGTGCCCGGGACCCTCGC
GACCTGAGACCATGTGCTGAGGTAACCCATATTGAAATATCAATAAATACAAGAGCGAGG
CATCGCGATGGACATCGTGCTATAGTATTAAATTGAAAGTAACACCAAATATTATTTATA
AACGTATCTCAATACTTATCTATGTAAACTATTCTATATTAGAGATCATTCTTTTAAACA
AACTAATAATTGGAACGAAGTTCCTTATCGCGCGTTATCGAAAGGGGGCTAGACGGA
(2697 bp)

- SilkBase 1999-2023 -