SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16279c1_g3_i18
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transient_receptor_potential_cation_channel_trpm_isoform_X2_[Bombyx_mori]
Ontology
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007005 P mitochondrion organization
GO:0010960 P magnesium ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0043052 P thermotaxis
GO:0046873 F metal ion transmembrane transporter activity
GO:0051262 P protein tetramerization
GO:0055069 P zinc ion homeostasis
GO:0055085 P transmembrane transport
GO:0070838 P metal ion transport
GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:2.01 TPM:1.97
ORF EntryO_TrvaFAMAMG18830_complete:A_TrvaFAMAMG_TR16279c1_g3_i18
Sequence
(Nucleotide)
CAGATCAAAAAAAAAATGCGACTTCATAATAAAATTTAATAAAAATCAATGACCAAGAAT
CTAAAGTGGATTAGCTTGTCAAGCACGAATTCATCTATTATACACAGATGTAGAATTTGA
CCTCTATTATTACAAAACGTGAAAAAAATTGCAAGCCAGAAAAATAAAATTTAAACTAGC
GGAAAGATAAAATGCTTATCTGCCATTTAGGCGAACAACTATTGTATTGTAATTTAAATT
TATTACCACGAATTAAGAACGTCGTTCTTTGGCCGATAATTAATATTTAAAAACACTTTT
GTAATTTGTCCTCTTTGCATTGAGTTCATGATAAATTGTGACTAAACGAGCTCTTGAATA
CGTGACATTAAGCCATTTAATGGTGCATATTTTTTGAGTTTTATGCCGGGGTTAGGTGTG
GCAGGCTCAGCGCGGTTGTTCTTTGTTCTGGCACGGGGGTCGGCCGATTGCCAGCTGTCT
TCACTTCGGTTAGCATCGTCCCCGTACGTCACCCGCCGCAGTCGAGGCCCGCCTCTCGTC
ATTGTAACACGTGGTGTCCCCGCGACATCTAAACAAAACTTTGTTACGTCAAATCAATGG
ATATAACCTAACTAGGCGCGAGTTTCGCAAACCGACGACTGAAATGTAACCCTTTTGTTG
TTATAGGCTCAATTTTTTATCGATGTGCCCGTAAATCGTGTTCGGAGTGTAACAAGTGTC
AGCTATGTGAATTGTTTTGTGCTGTGTATTGTTAATAAGGAGCTATGAGTATTCAAAAGT
GTTTCCTGGATAATTCCAGCAGGATGATAAAAGCCATGTCAACGGCTAAGTCCAACAACA
ACGAGGCAAAGACGAAAACAACACGAAGCTGGATAGAGAGTACATTTCAGAAGCGAGACT
GCAAGTGCTTCGTGCCGAGCGCTAAGGACGAGCATGTATGTTGGTGCGGCCTCAGCAGAA
CAGCTCATGGTGCTAACATCGTCGTTGCGAATCCTGGAGAAGCATGGGTTCCTGCTAGGC
ACACACAGGCAGCACCTACTGACGCGTACGGAACAGTCGAGTTTCAAGGTGGCCCACATC
CTACTAAAGCCCAGTACGTCCGACTATCCCACGACACAAGACCAGAGTTGATAGTCCAGC
TTCTGACGCGAGAATGGGCTCTGGACAGGCCGAAGCTGCTCATCACCATCCAAGGAGGCA
AAGCTAACTTCGATCTGCAGCCGAAACTGAAGAAGGTGCTCAGGAAAGGATTGCTCAAAG
CCGCGAAGACTACTGGTGCTTGGATTTTTACTGGTGGTACTAATACTGGTGTTACCCGTC
AAGTAGGCGATGCATTACAACTGGAACGTTCGCAAAGGGCAGGCCGAGTCGTCAGCATCG
GTATAGCGCCCTGGGGCATCGTCGAAGGAGCCAATGAGCTGATAGGCAAAGGACGGGATG
TGCCCTACCACGCTATTGCGTCACCTAGATCGAAGCTGGCAGTCTTAAACAATAGACATG
CGTACTTCTTGCTCGTTGACAACGGTTCTGTCGGCCGGTATGGTGCTGAAATAGTCTTGC
GAAGGAAACTGGAGAAATACATCGCAGCGCAGAAACTACATCCTTACACGCATTCCTCTA
CCCCCGTGGTGTGCCTCGTCATCGAAGGAGGAACGAACACCGTCAGAGCTGTCCTGGAGT
ATGTGACTGATAACCCGCCGGTACCAGTCGTGGTTTGCGATGGCAGTGGACGAGCGGCTG
ACCTTATAGCGTTTGTGCATAAGTACGCCTCAGAAAGCGGTGAACAGACAGTCTTGGAGT
CCATGCGTGATTACCTCATTGGCACCATCCAGAAGACCTTCGAAGTAGGACTGCAGCAGG
CAGAGTGTTTGTACACTGAACTGTTGCAATGTACCAGGAAGAAGAACTTGATAACAGTCT
TCAGGATTCAAGAGCGCGCCGAAGGTGGTGAAGTGCAAGAACTGGATCAGGTCATTTTGA
CTGCACTGTTTCGGGCCCAGCACCTGACTCCGAGCGAGCAGCTTTCTTTGTCGCTCACTT
GGAACAGAGTGGATATCGCCAGGTCCGAGATCTTTGTTTATGGACAGGAATGGCCGCCAG
GTGCACTCGACGAAGCAATGATGCAAGCCCTAGAACACGACAGGATTGACTTTGTAAAAC
TTCTCCTAGAAAATGGTGTATCAATGAGGAAATTCCTCACAATACCCAGGCTCGAAGAAC
TGTATAATACCAAGAGTGGGCCGAGCAATACCTTGAGGTACATCTTGAGAGATGTCAGAC
CTCATTTACCAAAAGGCTATGTGTACACTCTTCACGACATCGGTTTGGTAATCAACAAGC
TCATTGGAGGAGCTTATAGGTGCTACTACACTCGTCGAAAGTTCCGTCCTATCTACGCGA
AGGTGATGAACAAGAGCGTCAACGTTCATCGGAACAGCGCCTCCTTCACCAGGCACACTG
CTGGAGGCCTGTCTTTAATAACTGGGTTTATGCCAGTCACAAGCGAGATGGCGCTCTTCG
ATTATCCCTTCAATGAGCTTTTGATGTGGGCAGTCCTAACGAAAAGACATCAAATGGCTC
TCCTGATGTGGACTCATGGTGAAGAATCTCTCGCGAAATCTCTGATAGCTTGCAAGTTAT
ACAAGGCTATGGCTCACGAGGCTGCCGAAGATGATATGGAAACGGAAGTATATGAAGAAC
TGAGGCATTATGGAAAAGAATTCGAAAATAAAGCCCTAGAACTATTAGACTACTGTTACC
GCCAAGACGACGATCAAGCTCAACAGCTCCTCACATGCGAACTCCAAAACTGGTCCGGCC
AGACCTGCCTCAGCCTGGCAGTAACTGCCAACCACAGGGCTCTGCTCGCCCATCCATGCT
CCCAAATAATACTGGCAGATCTGTGGATGGGTGGTTTGAGAACAAGAAAGAACACCAATT
TGAAGGTAATTCTGAGCCTGCTGTGTCCGCTGTACATTCTGAGGCTCGAGTTCAAGTCGA
AGGAGGAACTGCAGCTGATGCCGCAGACGGAGGAAGAGCATCTCGAGAACGAAAGCATCG
AGGATGATAGGAGCAACAAGGATCCTACCGATGCAGAGCAGGCGTTGATTGGCTCAGGAG
AATGCGAGACGAGGGTCGATCAAAACGGGAAAGTGGGTAAAGTGGGTTGGGAGCCTTCAT
ATAGAGAACTGCCGGAGTACCATCCGTCAGAAATCAAGAGAATGAGGCCGCTTCGTTTGA
GGAAGAAGATTTATGAGTTCTTCACGGCGCCGATCACGAAATTCTGGGCCGATTCGATAG
CCTACATATTGTTCCTATTGATGTTCACATACACAGTATTAGTCAAGATGAATCCTACGC
CATCTTGGCCAGAAATATATTCTATATGTTATATATTAACTTTCTTATGCGAGAAGATTA
GAGAGATCGTAACTTCCGAGCCTGTTGCTATTAGACATAAGTTCAGTGTATGGGCATGGA
ATATGTGGAACACATACGATGCAGGTTTCATAATATTCTTTCTCGTTGGACTGACGTTAA
GATTGCGCGAAGTTTCGCGGGACGTGGGGAGAGTTATCTACTGCGTCGATATTATATATT
GGTACTTAAGGATATTAAATATATTGGGTGTTAATAAGTACTTAGGTCCTCTAGTCACAA
TGATGGGTAAAATGGTAAAGAACATGATATACTTCGTGGTGCTATTGCTAGTTGTATTAA
TGTCGTTCGGGGTTGCCAGGCAAGCCATATTACACCCCGACAAGGATGCCAGTTGGCATT
TAATAAGAGAGGTATTCTACCAACCGTACTTCATGTTGTACGGTGAAGTTTTCGCACCGG
ATATAGATCCTCCGTGCGGGAAGGAGATAGGCGACCGGAAGTGCGTCACCGGAAGATGGA
TCACGCCGATCGCCATGACGGTGTACCTACTGATCGCCAATATATTGTTAATAAACCTCT
TAATTGCCGTTTTCAATAATATATTCAATGAAGTCAATGAAGTCTCGCATCAGGTATGGA
TGTTCCAAAGGTTCACAGTGGTGATGGAATACGAACAAAAACCAGTACTGCCGCCCCCAC
TTATAATCTTCTGCCACATCTACGCGGTCGGCAAGTGGGTCACCAGGAATGTCTCCCACA
AGAGGTTCCAATACGACAATGGTCTGAAGCTGTTCCTGGAGAAGGAGGATATGGAACGGC
TTTATGACTTCGAAGAGGAGTGTGTTGAAGGGTATTTTAGGGAACAAGAAGTTAAATTGT
CAAATTCTATAGAAGAGAGAGTAAGGAATACAACGGATAGAGTAGAACATATCACGACCA
AAATGGAAGATTTAAATCAAAAAGCTAACTGCCAAATACAATCAATGCAAAGCGTAGAAT
TTAGGTTAAGAAAGCTAGAAGACATAGCGGAACAGACTATGAGTCATCTCGCCGTAATAC
ATCGGTTCATGGCGACTCATCCCTCCCTCGTCAATCGAGGCTCAACTGACACCCTGGGAC
CTCCTCCTCCGACCTTCCAGGCTGGTGGAAACAGACTCAGGACTGCTAGTGACCGGTCTG
AGGACGAGCAGCCCCATTCAGGCCCCGAGGCCATATGTGGCGAACCGAAAGAGCCCGAAG
CTGATTCAATGTCAACATCCTCTGGGGGCAGTGCCGCCGGACCTGATGTCACTGTGGTCA
GACAACAACCGGCTATCATGCCAGCTAGACAACGGTCCTCAGATAGTAACAGGACTGAAC
CTAGCGACGAGAAGAAAGTGGCATCATCAACAGACGATGCCTTCCTCCCCGAAGTCAGGG
AGATGCCGGCTGACCTGCACAGTCTGAGACCACGGACCACCTCGGGAGGAACCAGGAGGA
CTGCTAATACTAGACGGCGTTCAGAAGGCGGCAACGATTGCGGCATGGGCCCTTATTCGA
CTCAGCACTTGGCCCCAAGGAGACAACACAGCCAAACGCACTCCGAACCGGACAACTCGG
CCGTCGACGCTGGTTCTGTACACAATTCTGTTACTGGTCCGACCTCCGGTTGGGAGGCGA
CAGGAGGCGCCGCAGGAGTATCATCAGGTCGAACAAGAGTAGGAGGTGCTCCTCGATCAC
TGTTACTGGCCATGCACGAGTACACCAGCATCACTGATGAACTGGAAACTGTGTATGGAC
TGTTCTCACCGCCACATACACCCAGGACCCCCATAACATCCCGTCTCCTCTCCCCCGCCC
GGGCAGCCTCCCCCTCCGTCCGTCGTCGCCACGCCAGCGAGATGTCCAACCCGGAGTTCG
CGCTCTTCATGGAGAAGGAGCATCTCCGAGGAGCCGAGGAGGATGATTACATCATCATGG
AGAACTTGATCCAGAGGCGATACGAGGAGGAGGAGAATGGGGAGCAGGAGGTCGCGGGCA
ACATCAGCATCAGCGTCTGCATCAACACCAGCGACCAGCCGGGGCAGAGCGCGGGCCTGC
TCACCGTGGACAGGCGACTGCCGCACCAGAGGCACTCCCTGAGGAGATCATCAGCTATCG
ACAGTCGGGAGCTACCATCACCCCTGCAACCGTTGCTCGGAGACGACGCATGCGGAGAAG
TCTTACTGCCCGTACCTAGGCAGCCCTCTGGCGATACAAACGCATCAAGTGACATATCTC
TATCGCACATGGTGAGCGAGAACCTCCCCCCTCGCCCCTCCATAGTGCTGGACTCGTCTC
AGTTGCCGCGACAACGATCCGCCGAACAACAGCAGCCGCAGTGCCCGGGACCCTCGCGAC
CTGAGACCATGTGCTGAGGTAACCCATATTGAAATATCA
(5799 bp)

- SilkBase 1999-2023 -