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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16267c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.19 TPM:1.17
ORF EntryO_TrvaFAMAMG18677_complete:A_TrvaFAMAMG_TR16267c0_g1_i2
Sequence
(Nucleotide)
GAAAAAACAAAACACTCGCGTGCCGGTAACAAAAGTGAGGTTATACTGGTCAGATTTTAC
TTTCACTGTAACTTTGTAAGTAGTGAATAAAACTTCGAAATAACACTAAACGGCAAGCCT
GACTGGGCCCATAACCTGATGAAATAATAACAAAGGCGATTAACTTGATAAAACTATGTA
TTAGAATAATTATTAAATGTAACAGTATGACAGTGCACAAAGAGCATAGACAAGAGAGAG
ACTTGAGTGTTGTCAAGTACAACCTCTGTAAATGTTGCTATATTAATATGTGTAGGCGTC
CAACTTCTCAACATCCTCTCCTGGACGCGGACACTTCAAAAATAGACCCATCGATGCGAT
GAAATTTTCATGCTTCGGTCGAGGGAGACCTTTCGTCAAAATGTCGGCGACCATTTCTCC
AGTGCATCTGTATTTGACCAATACTTTTTTGGCGGCAATCTTCTCTCGCACGAAGTGGTA
CCGGACGTCTATGTGCTTGCTGCGCGCATGATAGACTGCATTTGCTGAAAGGTTAATGGC
GCTTTGATTATCGCAATACAATATTAAAGGAGTACCTTTAAATTCAGGTTGGATTTCGTC
AGCCAGCTGTTTTAGCCAAAGTGCTTCTTGAATGGCCGACGCTAGTGCCATATACTCAGC
CTCACTTGTAGAGAGGGCTATAGTTTGCTGTTTCTTAGAGTTCCAGCTTATTGCGGCACC
CTGGAATGTAAATATGTAGCCAGTACAAGATCTTCTGTCTTCTATATCATTTGCCCAGTC
AGAATCGCAAAAGCCAGAGATTCTGTCATCAACATTCCTTTTGTACACTAGCTTCATGTC
TATTGTGGCTTTCAGATATCTCATAACTCGTTTCAGCGCTGCCCAATGTTCACTAGTAGG
TTGACTATTATATCTACTAAGAGAATTTACTATATAAGTAATGTCAGGACGAGTCCCCTG
TGACAAGTACAACAGGCAGCCAACAATTTCTTGGTACGGGATGTTCATCATGATTTCTTG
TTGATTTTTAGCCTTTTTAAACTTGACATTAGGATCAGCAGGTGTCCACATCGGCTTGCA
TTTGTCCATGTTAAACCGAGTAAGTATTAATTTTATATAAATAGACTGACATAAGGAGAT
CTCATTTTCATCTTGTGACATTTTAAATCCAATACAATGTTTGGCTGTTCCTAAATCTTT
CATATTGAATTTATTTATTAATTTTTCTTTTATCATGTCTGATGTTTCTTCTTTATTATA
AAAATACAAAATATCGTCCACATAAACTGCTATTAAAAGCATATCATCTTCACTTAAGAT
ACGGTAGTACACGCATGGATCTATGTGTGAACGAGTCATTCCAATTTCTAACAAGGCAGA
ATTTAACTTCTGATTCCATTGCCTGCTGGCTTGTTTAAGACCATATAGTGACTTATTTAG
TTTACAAACTTTATTTTCTTCTTCATAGCCAGGAGGAAAAGACATATAAAGCTCTTCATC
AATGTCGCCCTGTAAAAAGGCCGAGACTGCATCCATTTGGTGTATTTTGAGTCTGTACTT
GCCAGCGAGACCAATAAGATATCTTAAGGAAGTATAGCGGACCACCGGAGCGTATACCTC
ATGGTAATCAATACCTTTGACCTGTTTGTATCCTTTAATTACCAATCTAGCTTTATATCG
AGCGACAGAACCATTAGCATCTAGCTTAGTTTTGAAAACCCAGCGGCAAGGAATTACTGA
CTTTCTTTCTGGTAAGTTTACTATGGTCCATGTGTTATTCTGTATTAATGACTGATATTC
TGCTTCCATAGCTTTCTTCCATTCATCAGCCTTATCACTGTTCAAAGCTTCTTTAAGATT
ATGTGGATCACTGTTCAGTAAGCACATAGTTGATTCAACATTCTGACACATAAGTGAAGA
TGGACTCTGATAATCGTCATTATTTACTGACCTTCTACGTAGCCGTGGTCTCAAAGTTAC
GTTGGATACCAGTGGAGAGGCTACCGTTTCATCAGGTATGTATGTTTCATCATTAACATC
CTCAAAAATACTAGATTCATCTGAAATACTAATACTTTGAGATACATCTTGTATTTCCCT
TTCATGTGTCTCATCATCAATGCTCCTTTCCACAGGTTCTTCGGGTTCATCACATAGAGG
TAAGTATGTAGTTTTCTTTTCTGTGTGTTCATTACTACCTTCATGTGTATTTCTAGCTTT
AATTTCCTCTATATCCATGTTATTCTTAATGAATTCTTTTTCAGGTACTTCATCCACTAT
ATTTCGTTTAATTGCAATTTCAAGGAACACTACATCCCTACTGACAATTCCTTTCTTTGT
TTCAGGATCTATGAACTTGTAGCCTTTTGTACCGTCGCAGTAGCCTACAAATATTAATTT
GCGCGACTTTACATCCAATTTACTTCGGTTTTCTTTAGGAATATGCACCATCGCAGGACA
TCCGAATATTCTCATATGGTTCAAATTTGGTTTTTTTCCAGTCCATACCTCATGTGGCGT
TACATCTGATAAACTGCGAGTAGGAGAACGATTCAGTATGTAAGCTGCTGTAGTAACGGC
TTCAGCCCAAAAATCTTTCTTGCTCCTCCTATTGATGTCTGCTGCATCGGTCCACATACA
TCACTGTGGATAAGTTCTAGCAACCCGGTTGCTCGGGAACCTTCAGCAGGGAACGGTTTT
CTCGTTTGCTTGCCTTCGAGACAGGTAACACAGATGGAATTTTCCATTCCTGATGACAAC
TTGACTCCTTCTGTACAATTAGGTATTTTATTAAGACTAGTATAATTTAAATGGCCCATC
CTTTGGTGCCACAGATAAGTATCATCTTCAGCCTTGGCCATCATGACTTGCATTTCTTGG
GAAGTATTTAACAGGTATGTTGCATTAATTAATCTGGCCTGCGCTACTAATTTATTACTA
GGATTGTAAATTTGACAGCCAGATTCATTGAATATTACTTTGCATCTGTTTTGAATTATT
CTGCTGACAGACAACAGATTAGTTTTTAACTCTGGTACAAATAAAACATTCCTCACCTGT
ATTGAATCGGTGCTGCCATCATGTGCTCTTACCTTAATGCATACATTCCCACAGCATTCT
ACTTTTAATTCTTTGTTGTTAGCAATTCTAATGCTCGGTACAGGTGGAGAGGTGATATCA
GTGAGCCAGTTTCGGTGCATTGTCATATGCATAGATGCTCCTGAGTCAACATGCCAAGCA
TTGAAGTCATTTGCAGTTGATGCTGAAAAAGCTGCAACAAAACTTGTGTCTTTATTTGTT
TTTTTATTGTTGTTTGTCTTATTATGCCAACAATTTCTGCTGAGATGTCCGTACTTATTG
CAATTAAAGCACCTAGGACCTTTTTTTGTCACTTTTGGGCACATCTTTTTTTGTGTTAGT
ATAAAGCGCGGTGGTGTCTGACATTTTTACTTCCTGTAGTAATTTATTCTTTACTAAGTC
AGCACTTATCTTCATACCGGAACTTTCTAATCCCATAATCATGGGCTTATACATATCTGG
CAGCCCTGCCAGCATTAAAGTGCCCAACCACTCATCGTCCACATGAAAATTTATATTTCT
TAGTTTGTGCGCGGCTGTCATAATTTTATTAACATAGTCCTCCACTGACAAGCTGCTTTC
TAAATTAGTGTTAATTAATTCTTTCAATAAGCCAACTTTCCGTGTCAGTCCTTGGTCTTC
AAACGCCTTTGTCAAATTGTCCCAAACCTGCTTTGCATTCTGTGCATCCTGTATGTGCAC
ATATAAAATTGGGTTAACCAATAATATTAACTTTGACTTTGCTTTGGTGTCTTGTTTAAC
TGCATTGGGGTCGGAGACATCAGGTACTTTCAGAATGCAATTATAAAGATCTTCATGTTG
TAGGTACGCTTTCACTGCGAAGCTCCAGTTTGACCAATTGTCGCGACCCGTCAACTTCTC
AATCGATAACATAGCATTAGTTCCAGCCATATTTTTATTGTATTATCTGTTAATGGTTGA
ACAGAGAAAAAACAAATCACACGCGTG
(4047 bp)

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