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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16266c0_g1_i7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dystonin-like_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.39 TPM:3.32
ORF EntryO_TrvaFAMAMG18638_complete:A_TrvaFAMAMG_TR16266c0_g1_i7
Sequence
(Nucleotide)
TTTAACATCAATACAAATATCGAGCAAAAACCGGAAGCTTGCATTCTACTAGCTTGTACC
CTTTAATGCCTCGTTGGGTTGGCTTAGATGCTTCGCCGCTCGACTCGCTTATATTACTTT
CGTATTCATTGTCACTTGTCATTCCCGATATGCTGAGCAATGAAGAATCATCTTCCGGAC
TTCTCTGCTCAGACTTCCTGGTCGGATCGAAGGAAGTAGGACTGGGTTCTTGGGAATTTT
CACGGGAGTTGGACTTTCTAGACAACTTCAAACGTCGTTCTACAGAAGGACTTCTTTGAG
ATCGATTACCGATGTAAACAGGGATTTTAGTGGATCCTTGGGTTTGGAATGCAGGGTGGT
TGTGGGATAATGACTTAGGAAGCTCAGAGGCAATGGAAGATGGCTGGGAATGTGGTGGGC
TCACTATCGGCGGCACGACTGTCAGTGTCGGTATACTTGACGTGCGGTACATCCCTCCGC
TAGAATACCTTCCACTGGCTGGCGTGAGGTAACCAGTAGGTGTTCGTGGTCGTGAACCAT
TTGGTGTGCTGACTCCGAGTTTGTTTGCTGTCGCAGCAGCTCGGGCAAGCGACGCTTTAG
TATTTGTAACCTTCCTCATTGGTATGCGGGATGGTGTTGTCGCGTCATCTGTACTATCCA
AAGATAAATTCGATCCATGTCTTGAAGGTGGTTTTGAACCTGCTCTTGATCCAGCTCGGG
AGCCAGGTCGCGATGTTCCAGGAGTCAAAGTAGACCTTGGGACACTGGGTTTTCTGTATC
TCGTTCCAAGTCCACTTGCGGCTTCGTTGTCACTGAGTGAATCAGGCGTTCCCGCGCTTA
ATGAAGATCTGGAGGCTCGTCCAGCTACCCCACCTCCAGTCGACATAGGTACTGACCGAG
CAGTTCTTTCTCTCACCTTCGTGATTGGTCCGGTTGATGGAGGAGTATTTGTGTTAGAAC
GAGGCGTGCGCGGTCTGAACGCTGCCATACTTTGAGATACTCCATCAGCCAAAATAAATT
GTTCTCGCAGTTCGATGTTGGTGCGTCCTTTGGCTGCATGTGGAGATTTGCAAAGGATGT
AGGATGGAGTAGGATTGAAGAAAACCATTTAGTAAAAGGACAACGGAAATGAACACCAAA
GTGTTGAATTATGGGATGGCGTGCAAAGGTAAAGGATAAAAGAAAAAAAACAACAAACAA
ATCAGAAAACATCAAACATAAACAACAACAAAAATTGGGAATAGAAAATTGTGTGCAGTT
AGGAATAGGATTGTAAAATACAATTAGTATATTCTCACACCAAATATGCTTTTAAGTATT
GAGCAAAGGCAATTTAGTAGACTATCCTTAT
(1351 bp)

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