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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR16211c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		eukaryotic_initiation_factor_4A-III_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006413 P translational initiation
GO:0006810 P transport
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0045451 P pole plasm oskar mRNA localization
GO:0045495 C pole plasm
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0051028 P mRNA transport
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:1903040 P exon-exon junction complex assembly
Transcript
Level		FPKM:46.67 TPM:45.73
ORF EntryO_TrvaFAMAMG18413_complete:A_TrvaFAMAMG_TR16211c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTACACAAGAGAATTATATTACGACAGTAAAGAAATACAGACAACTGCT
ACTTATTACAATAACATAAAGCATCTTAAAATGTGATTTTAGCCTTTCACCATGTGCTCA
GCCAGAAAACCCTGGGTATATAGAAGATCAAACAAACACTGACTTTACATTCTTATTAAT
ATGAGTATATTACAAATTAAATTAAATCTGCAACGTTCATGGGCATCTCATCAATCTGGG
TAGAGTAATACTGTTCAATGTCTCTCAAGATCCTGATGTCATCTGATTTGACGAAGTTGA
TGGCGACACCCTTGCGTCCGAATCGACCTGAACGACCGATCCTGTGGATGTACAGCTCAC
GGTTGTTAGGCAGGTCGTAGTTGATGACCAGTGACACCTGTTGGACGTCTATACCGCGCG
CCCAGACGTCTGTCGTGATTAGGACACGGCTCTGTCCAGATCGGAACTCCTTCATAATAT
TGTCTCTCTCTTTCTGCGGCATGTCACCGTGCATTGAGCTGACAGTGAAGTTGGCTTCCT
GCATCTTCTGAGTGAGCCAGTCCACCTTCCTCTTTGTGTTACAGAATATTACGGCTTGTG
TGATGGTCAGCGTGTCGTAGAGATCACACAAAGTGTCAAACTTCCATTCTTCTCTCTCGA
CTGCCACAAAGAACTGCTTGATGCCTTCTAGTGTCAACTCATCACGTTTCACCAATATTC
TTATTGGATCAGTCATGAACTTTGAAGTCATCTCCAGTATCTCGTGGGGCAGTGTAGCCG
AAATCAGCACAACCTGAGTTGCTGGAGGCAAGTAACGGTACACATCGTAGATCTGCTCCT
TGAAACCTTTGTTCAGCATCTCATCTGCCTCATCAAGTACTAGCATCTTGATTGCCCTGG
TTCTCAACACACGCCTCCTAATCATATCGAAAACTCTGCCAGGAGTACCAGACACAACAT
GCTGTCCATAATCTAACTTCCTGATGTCTTCACCGAGATTAGTTCCTCCGATGCAAGCAT
GACATTGTACATTCATGAAATCTCCAAGAGCCAATATTACTTTCTGTATCTGTGTAGCCA
ACTCACGGGTCGGGGAAAGTATTAGAACTTGAGTTTCACGTAAAGTTGTATCTAATGTTT
GAAGAATGGAAATGGAAAATGTAGCTGTCTTTCCTGTACCCGACTGAGCTTGGGCGATGA
CGTCTCTACCCTTCACTATGGGCAGGATGCTTCTCTGCTGAATGGCTGATGGTTTCTCGA
AACCGTAGGTGTATATGCCTCGCAGTAGCTCGTCCCGTAGGCCCATGGAATCGAACGTCG
GAATAACTTCGACATCTTCACTTGTGTCAAACTCCACGTTCGATAAATCCTCTGATAATA
TTTTCCTATTCGTTGATATTTCCGACGAAGTCATTTTTACTCTTGTTTCCGCTTCACCAC
AACAAACAACACGTAGCTAGTAAAGAAACGAGGTTAGATTCTCATTAGAGGGAAAAGGAA
ACTTGTGTTTCAGTAAAGGATTGAGTTCGCGTTTGTAGAAATAAACTGTTTTCGTCACAT
AAACGCTAAACCATACAAGATAATTTCTTTTCGTGATACAAAATTACCAAATCTACCCAA
TTTACCACAATTTTTGGTTTCTCCACTAACTTTGATTAGGACTAAAACAAG
(1671 bp)

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