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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15925c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_spectrin_alpha_chain_isoform_X5_[Bombyx_mori]
Ontology
GO:0002168 P instar larval development
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007308 P oocyte construction
GO:0007417 P central nervous system development
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008360 P regulation of cell shape
GO:0016199 P axon midline choice point recognition
GO:0016323 C basolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0030707 P ovarian follicle cell development
GO:0030721 P spectrosome organization
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0046872 F metal ion binding
GO:0048134 P germ-line cyst formation
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0060429 P epithelium development
Transcript
Level		FPKM:52.03 TPM:50.98
ORF EntryO_TrvaFAMAMG18272_complete:A_TrvaFAMAMG_TR15925c0_g1_i1
Sequence
(Nucleotide)
TTATCGCTAGATGGTGATGTGCTCAAAATCTTTTAAAACACGTTCCTTTTAAATTATAAG
ATATCTTTTGGGGTGGGTGTCCCATGACCCTCAAGTTTATGAAGTAAATAATTTGATTTT
ATTATTACTTGACAACACAGGCGATGTTAAAAGGTATTATGGAAATCGATGCATCATTGA
TTTACGTTCGCATTTCGAAATTGAGCTGACATCAGCACGAATTAATTAAAGCAGGTAAAC
TTTTAGGGTAAACTATAACTTTACAGAAATAAACCAGGTTTTGATATATGAATAATAGTT
TATTGATAATAGAAATACAAAAAAATAAATAAAATTTCAGCAAGCTTACAAACATCTAGC
GTAAGAAATGTAACTTTAATAATACTTTGACGTAAAGCGCAGTCCAGTAAACGGTAGCTT
CGTTTTTCTCTGCTAGTCTCAGAGAAAAGAAATCCATACCCTTACGGTACTTGAACCTTG
GAATACACAAGTACTTCCATAGATTCCTTCGAACGGAACAGTTCAAATCGAACGTCCAAT
CCGAACGGCGCACACGATACAACAAATCTATAAACTTTGATAAATAACTAATCTCTAATT
GAAAACTCGGTAAATGCTCGATGGAATAACATTAATAAGCTTTTTCTATCTAGCTCAAAC
ATTTAATAAGTTACATTCAGTCAAATACAGAGCACATGCCATCTTATTTAGCGCATAAGG
AAGGTGTAGAATGGAGTTGGCCATTGTTAATAACATTTCAACTGCATTCGTTTGTGACGA
TAGCTTTAATAGGTCTTAAATATTCTAAGATGTTTGATGTAAAGCAACGGCCAACTCCAA
AGTGAACAAATAAAAAAGCTTGTTAGTTTACAAGTTTAATGTGTGTGTATAAATAGAGGT
GCTGTATGTAGAGGCGGTTCAGTTCTGGAAGAGCGTGTGCGTGAAGTCGATGTAGTCGAG
CGCGTTGGGCACGGGGCGCTCCGTCTTGGAGTCCACGAAGGGCTTCATGCGAGCCACGCA
GTAGTCCGCCATCTCCTTCGTCAGGTTAGCATATAGCTCGTCCTTGGTGACGTAGGGCCT
GTCCTGGTGCGCGGTGATGGCTCGGAAGGCGTTCTCGATCTCCTCGGAGGAGTGCACGTT
CTCCGTCTCCTTGCTGATCATGAACGCCATGTACTCCTGCAGCGACACTTGACCATCGCG
ATTCGGGTCCACGACACTAAGTATAGACTCGAACTCGGGGTCCGGTTGTCCCTCCTCCAC
CATGGGCAGGTCGTAGCCGAGCGCGCGCAGACACGACTTGAACTCGTGGTGGTTGAGGCG
CCCGGAGCGGTCCTTGTCGAAGTGCTTGAACATCATCGAGAACTCCTTCAGAGCGTCCTC
GCTTACACCCGAGTGGTTCCTGGCCTGTATCTGCTGCTCGAGGTTGTGCTGCATGCGCAT
GGAGAGCTGGTCGAGCTGGTCCCACTGCTGGGCGAGTCCCACGGTGCTGTGCTCCGTGTA
GCGGTTGTCCAGGATCAAGTGCTCTTCGAGAGCGGCGCCTAATTCTTCAAGGCGTCTAAG
ATCGGCTCTCCTGGCGCGCACCTCGGAGGCCCTCTGTCGGAGCGTGGCTAGTTGCTGCTC
GAGCGAGCCGGTGCCCTCCATCATGGATGTGCGAGTCTCGGTGAGCCATTGGTGGAACGT
GTTGGCGTGTTTGGCGAACTCCTTGCGGAGCTTGTCGTTCTCCTCTTGACGCTGAGCCTC
CTTCGACAGCTCGACATCTCTCTCAGCGATAATCTTGCGCAAGTTCCTCCACGTGTCGTC
GAGCGCCTCCATGGTGAACCAGGTGTAGGGGTTGGCGCCCACGTTGAACGACTTGATCTG
AGCGTCTAATGCAGCCAGCGCCTCGAAGTCGCTCTGAGCTGACGATAGCGACGCCTGGAA
CTGTGCGTGCGCGTCCTTGAGAGCTCGTATCTCCTCGATGGAGTTGCAGCGCACCGGGTC
CGTCAGATCCTCCTCCGCGTTCTCGAACCACGAGTTGAAGGCTGAAGCCTTCTTAGCGAA
CGTAAGATAGAGTTCCTCAATCTGCCTGAACTGGTCCTGTAGCAGCAGCAGTCGTTGTTT
CCTGGTGGCGGAGTCGGCGAGCAGTTGTTGCCAGCGCGCGATGACGTCACCGTGACGTTT
CACAATGGCCGGCGTTTGTTCGTGGCCCGCCGCTACGAGCTGCTCCTTGAGGGACGTTAT
GTTCTGGATGCCTTCGTGCTCGAACGCGGCTAGACCAGCATCGAACGTGTCCTGCTTGGT
GAGCAGCGTCTGCACGGTGGAGAGATCTCGTCCGAACTCGTCGGAGCGCACGTGCGTCTC
CTTGTCCGCGATCCACGACTCCACCACGTCCGCCTTCCACAGCAGCTGCAGGTACAGCGA
GTTATCCACCAGCGCCACCTTGCGACGACTCGCCAGACCCGTCAGCTTCTCGAGCTTAGC
CTGCAATGCCCGTATGCGGTGTGAGAGCGCGTCGTGATGCAGGTTCCCGGCGGCGAGCAG
CGCGTCCCCGGCGGCGGCCAGCTCCCGCACTCGCTCCCCGCGCGCCGCCAGCTCCGCCTC
CAGAGCCTCGTGCTTCTTGAGGAGACCCTGCACCGCCGCCATGCTGTCGCCGCATTCTCC
TACAGCTACTAGTTGCTGCTTCTCACTTATCCAGGCCTCCTCCTCGTCGACCTTGGCGAG
GAACTGTTGGTAGGCAAGCGACTGCTGCAGCTTGGCCCCGCGCTCGGCGGCGAGGGCCTG
CAGCTCGTCCCAGGCGAGTGCCAGCGCCTTGAGCCTCTGTTCGATCTCGGTGACGCCGAG
GTTGGACACGTCCATGAGCTTCTCGCCGGCCTCCTGCACGGCTTGTATGGCGGGCTCGTG
GCTCGCGAGTTCGGCTTCCAGGCGCTTGTGTTTCTTGAGCAGGTTCTGTACGCCGGTCAG
GTCGCGGCCGTAGTCGTCTGATGCGACGAGAAGTTTCTTTTCCTTGATCCAGGACTCCTC
GTCGGCGATGTCCCTGAAGAACTGGTGCAGCGTGTTGGCCTCGTGCAGACGGGCGCGGCG
GTGCGCGGCGAGGTTGCGGACTCGCTCGAAGCGCTCGTTGATGGCGTCGCGGCGGGAGCC
GATGCCGGCGCTGTCGAACTGACCGCTCTCTACGAGCGCGTCCGCTTGAGCGTTCATATC
TTTAATCCTGTCCTCATGAGCCTGTATATCAGCTTCAACGAGTTGATGTTTCTTCATCAA
GTTCTGTACTGAAGCCAGGTCCTTGCCGGAGTCTTCAGAAGTCAACAAGCTCTCGACTTC
CCCGAGCCAGAAGTCGAGGTCCTTGACAGCGGCGATGTATGTGCGCTGTTTGTTCGCTTC
CTTCAGTTTCAGAGATTTCTCTGTTGTCTTTTGTGTGAGGTACTCCCATTGGTCGGCGAT
GGATGCTAGACGAGCCTGCACGGCGTCCTCGCTTCCGCTGCACTGTCCACGTTGCACGAG
GTTGCCTCCCATGGCCAACACGGACTGTATGCGCTCGGCGTTGGCCGCCAACTCCGCCTC
GAACGCTTGGTGCTTCTGGTGCTTCGATTGGATGTTCGTAGGGTCCTTGTAGCTCTCCTC
AGTAGCGAGCTGCATCTTCTCCATGATCCAGTTCTCCATCTCGTCGGCGTCACGAGAGAA
CTGTTGCAGTGTTTGTTCATCGCCCAATCTGGATCGTTTTTCAATGAGAGCTTCCTTGAG
ATGCCTCCAGCGGTCGAGCACCTGTTTGCGTTTGTTGTCGATGTCGTCGGTCGCGTAGTG
GTCGGAGGCGATCAGCTGGTCGGCCAACGTTTGCAGTTGGGCGATCTTTTCTTCATGCGC
GTTGATAGCCTTGTCGAAGTCCTCGTGTTTCTTGATGAGTTGCTCCACATTGTCTGGCTG
CTGCTGGTCTGCGCTGTCCGCTTGGTCGTGTGGCGCGAGGAAGGCCTCTCGAGCCGCCAT
CCATCCCTCGGCCTGCTCGCAGTCGCGGTAGAACAACTGGAGTTCCAGGTTCTGGTCCAG
TTTCATGCGACGGTCTATCCAGGCGTTCTCCAATTCCTTTCTCTTGTCAGTCATATTGTC
CAGTTTCTCCTGTATATCGACACTGGCGTAGTGTCCGCCCTGTAACAGCTGCTGACCGAA
CAGCTCCAGCGCTTGGAACGTTCCCGCGCGGGCGTCCATCTCGGTGCGGTGCTCCTGGTG
TCTTTCGAGCAACGCTTCGGCTCCTGTGACGTCATTAGCCAGTTCAGTGGAGCTGACGAG
CGCCATCATGGAGGTCATCCACGCCATCAAGTCGCGGTAGTCAGATAAGAACCTCTGCAA
GTCATAAGAGTCGAGTAGTTTCTCCTTCCTTGCGTTGGCGCGCGCCTGCAGCTGCTGCCA
CGCCTCGTTGATCTCGCGCTGCTTGGTGTAGGTCGCGTCGGCCGAGTCGCCGTGCGTGTG
CATGAGGCGGTTCGCCGTGTCCTCTAGTTGACGGATCTTGTCGCCCAGAGCGGCCAGATC
ACGTTCTAAGCCTTCGTGTTTGCGTTGTAGCGTCTGCACGGAGCGCAGGTCCTTGCCGAG
GTCGTCGGAGGCGAGCGCGGCGTCCTTCTCCGCGATCCAGTCCTTGGTCTCGTCGACGTC
GCGGTGGAACCGTTGCACCTCGTGCGCGGACCCGAGCTGGGCGGCGCGCTCGGCCGTCAG
CTGCTGCAGCGACTTCCACTTCGAGTTCAGCTCCTGCATCTGCGTCTTGATCTTGAGCGC
GGCCTCGGTCTGTCCGACGGTCATGAGCTGCACGGCGATCTCGTTCATCTCCGCGAGTCG
CACCTCGTTGGCGCGCAAATCGTTCTGGAAGTCGTCGAACTTCTTCTGCATCACCTCGAC
CTGCTCCAGGTCCTCGCCGACGTCTTGCACTTGGGCGTGCATCTCCTTATCCTTAATCCA
CGTGGCGAGTTCAGCCGCCTCTCGTACGAGCACGTACGCCTTAACGGTCTCGTTGAGCTT
GTTCTGACGCTCGCGAGCCAGACCCAGCAGGTTGTCATATTGAGACTCGATCTGCTTCTG
TCTTGCGGCAATAGAGTTAGAGTCAGCGAGATTCTGCTGCGACGAGGAGAGACCGGCGTC
CACCTTCTTGACGTACGCAGCCGGAACGAAGCCTTGACGGTCGTTCACTTCCACCTTCCA
CCAGTCCTTGTTGTTAGAGTTGAGCAGGGTGAGCACGTCTCCTCTCTTCATGGAGACTTC
GCGCGGCGACTTCTCCGCGTAGTCGTACAGCGCCACCACGCACTCCTTGCCCGACTCGTC
CACCACGGGGGACTCTTGTTGTCTGCAAGAGTTGGCTTGTTCCCTCAAAGACTTGATAGT
GTTTCCGAAAGCCTCCAAATCCGAGAGCAAAGCTTCATGTTTCTTCAGCAGTGCTTCGGA
AGAGTCCTCGTCCTTCCCGAAGTCCTGAGTGCAGGCGATGGGCTCCTTCTCACGCATCCA
TGATTCGGCTTCGTTGGCGTCAGCGAAGTACTGCTGAGCTTGGAGCGAGTCTTCAAGGTC
TTGTTTGCGCTGCGCAGCCTTCTCCTGCAGCTGCGTCCAGTTGTCGTGCAGCGCGGTGAG
TCGTGCGGCGATGTCGGCGGCGGCGAAGTGTCCGGCGTCCCGCAGCGCCGCGCCGGCCGC
GCGCACGGCCTCCACGCGCGCCTCGTGCTGCGCCATCTCGCCGAGCACTGCCTGGTGCTT
CTTCATTAGGTTCTGGACGCCGATTAGGTCGCGACCTCTGTTAGTAGAAGCGATGACAGG
TTCCTTCTCCCTGATCCAGGCGGCCTCGTCGTCCAGGTCTCGGAACAGTTGTTGTGCTTG
CAGCGAGTCTAACAGCCGGCGCTTGCGGACAGCCATCGGCGCGTCGAGGGCAGCGTAACG
ACCCACCAGTGCATCCCGCTTAGCCTTAATGTTGTCTGCATCAAAGTGTCCCTTCTCAAT
GAACTGTTCAGCTTGGTTCCGTATGGCGTCGATGCGTTCCGCGTGCGAGCTGACGTCGGC
CTCTAATAGAGCGTGCTTCTTTTGTAGATTCTGTACGCTGGTCAGATCCTTCCCATAGTC
CTCGCTCATGAGTTGTCCCTCGACTTCAGACAGCCACAGCTCGATGTCCTCGACAGCTCG
GTTGTACTGCTGTTGTTGCGCCGCCTCCTGCAGCTTGCCTCCCTTCGAGCCGGACGAGTG
CACCAGCTTCTCCCAGATACCACCAAGTTCTTCCACGCGAGATGAGATTTGAGGTTTAGC
GAAGTGTTCCTGGTCGAGCAGGCGGCTGCCGAGCGCGGTGATCTCATCCACTCGCGGCTT
GTTGGCCTGCAGCTCCTGCTCGAAGTTCTGGTGTTTCTGCACCTTGCCGTTCAGGTTGGT
CGGGTCCAGGTACGAGTCGTCTGTTGCGAACTTCAGCTTCTCGTTTATCCAGCCTTTAGT
TTCGTCGCAGTCGCGTTCAAACTGTTGGTATTTGTAGGCGTCTTCGAGGAGAGCGCGGCG
TTGGTTCGACTTCTCCAATAGAGCGGCACGACGCTCCAACAACATTTCACGGCGTTGTGC
GACATCGTCAGCTGCGTAGTGGTTTCCTTCGATCAGTTTAGTAGCGAACTCGTCCAAAGC
TTTGATCTTCTCTTCCTGAGCAGCGAGAGACTTCTCAAAATCTTCGTGTTTCTTCAATAG
AGCTTCAACAGAGTCTAGAGAATCACCCACATCTTCGTTTGCTAAGAACGCCTCCTGTTT
GTGCATCCAGGCGTCTGCCTGCTCCGTGTCGCGGTAGAAGAGCTGCAGGTCCATGCACTG
CAGGTAGAGCACGCGGCGCTGGTCCCACAACGCGCGCGCCGCCCCCGCCTCCCGCTCCAG
CGTCTGCAGCGCCGTGGACACCTCGTCCGACGCGGGGTGACCGCTCGCCACCAGCGCCTC
GCCCGCCACCATGCACGCGCTGATCACGTCCGCGCGGGCGTCCATCTCACCCTTGTGCTC
TTGATGCCGTTCGAGCAGAGCCTCCGCTCCGGGCACGTCCTTGGCGAGGTCGTCGGCGGC
GATGAGAGCGCGCATGTCGGCGAGCCAGGAGAGCAGGTCGCGGTAGTCGGCCAGGAAGCG
ATGCAGCGCCAGAGCGGCCTCGAGTCTCTGTCGGCGGTGTGCGGCGCGCTGCACCAGGCG
CTGCCAGGCGGCGTGCGCCTCGTCTCGCTTGGCGCTGATGGCGTCGGCGTGGGCTCCGTG
TATGGCTCCCAGGCGGACGGCTTCTCCTTCGAGAACGGACACTTTGTCTTCCAAGGCGGC
GAGATCGCGTTCCACACCCTCGTGTTTACGCTGCAAAGTCTGGACAGTGGCAAGATCACG
TCCATAGTCATCCGATCCAAGTACAGCATCCTTCTCGGAGATCCAAGCGATAGTTTCGTC
TGCATCACGGTTGAAGCGTTGGATCTCGTGCGCTCCGAACAAGCGTTCTTGACGCATGAG
CGCCATTTGACGCAAGCGCTGCCAAGCTTCGTTCAATTCATCCTTCCTCTTGACAATGGT
TTCCCTCTCAGGATGTCCCTCGAGTACGAGTCTCTCAGCGAGCTGGTTGACCTCGGTGAC
TCGGTACTCCTGGGCGGCCATGTCCTTCTGGAACTCGTCGAATTTACGCTGAAGCACCTC
CACGTGCTCCAGGTCGGAACCGAATTCGTCGGCGCACACGAACGTTTCCTTATCATGAAT
CCAGAACATGACTTCATCGCAATGTCTCAAGAACTGTACAAGGACAAGCGCTTGCTGCAG
TTTCATTCCCTTCTCGGCGAGACGAGATAACAGCAGCTCCCACAAGCGATGGAGTTCGTC
TAAGCGACGGCGAATGGTCTCCGAAGCGAAATGTCCGGCGGCTATCATTTCTGATCCGGT
GTTGTCCAGAACTACGATAGCGTTGGAATGAGCTGCCACTTCTGCTTCGAAAGCTTGATG
CTTTTGGATTTTGGCCTGGAGGTTGGTGGGGTCTTTGTAGCTCTCATCGCTGGCGGCCTG
AAGCTTCTCTTGGATCCAGGATTCGAGTTCGTCGGCGTCACGTTTGAAGTATTGGAAGCG
ACGAGAGTCCTCGAGCTTTTCACGCTTAGCACGAGCTTCCTGCTTGAACTCTTCATAACG
GTTCAGAACCTCTTCACGACGTTCTTGAATGTCCTCAGCTGTTTCGAGGATCTTCACCTC
CTTCGGGGGCGGAATCTGCTCCATGATGGATACGTCAAATTACTTGAGCAACAATATTCA
ATAATTAAACACACAACAAAACACAGAAATTCTAACACTTTTCACAAGTTTTCATGAAAT
TTTTCGACGTTCGTTCGTGTCGCGTCACTTCACCTGCACCAATGCGG
(8327 bp)

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