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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15912c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_Tob1_protein_[Danaus_plexippus]
Ontology
GO:0003714 F transcription corepressor activity
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007184 P regulation of SMAD protein signal transduction
GO:0008285 P negative regulation of cell population proliferation
GO:0009967 P positive regulation of signal transduction
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030514 P negative regulation of BMP signaling pathway
GO:0030971 F receptor tyrosine kinase binding
GO:0045668 P negative regulation of osteoblast differentiation
GO:0046332 F SMAD binding
GO:0060212 P negative regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:1903507 P negative regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:60.70 TPM:59.47
ORF EntryO_TrvaFAMAMG18251_complete:A_TrvaFAMAMG_TR15912c0_g1_i1
Sequence
(Nucleotide)
GGCAAGTGCAGCCCAGTCCCCGTGACCTACATCCTCCGACCCTCGCTCGGGAAGCTGCTA
ATTTCCAGCATCGCGAGTTGTGCCTACGTCACAGCGGGGGCAGGGAGGTACCTCGTCGGT
TGCCACTGCCTCGCTCCGAACGGAATCGACAGTCCACAGCTCTACACCGACTCGACGAGA
CGCGCCAGTCGCGACTCGACACTGCGGCCGATCGCGATCCACAACCTCACTCAAGCCGCC
TCAATAACAATCCAAAGTGTTTCAATTATATTTTTTTAAGTGCTTAAACTGTGTAAAATA
TTTTTTTAATTGCAAACTGTGATACGGAGGCGGACGAAGGTTCGGGTGGGGCGCGTTCTG
CTGACACAGTGGCTCAGTCAACCGCCGGTCGCCGAGTGGCAAGCACCATCGATTTTCTCC
ATACGACTACGCTAGCAAACCTAACGATGCACATCGAGGTACAGGTCGCGTTAAACTTCG
TAATATCCTATCTATACAATAAACTGCCAAGACGACGAGTCAATATCTTCGGTGAAGAAC
TAGAGAAGGCACTCAAAGACAAATTCAGGGGCCATTGGTACCCAGACCGGCCTTGCAGGG
GCTCTGCTTTCCGGTGCCTTAAGACTGGAGGCCCTCTGGACCCTGTGCTGGAGAGGGCAG
CGAGGGAATCAGGCGTCCCTGTGCGTGATGTGCTGGAACATCTACCCAGGGATCTTGCTG
TGTGGGTTGATCCAGGTGAAGTGTCGTACCGCATCGGCGAGAAGGGCGCTGTGAAGGTTC
TGTTCAGCAGTGATGAAAGAGCTGCTGACGAGAGAACCGATCGTGAGGTAACCCGCGCAT
TCAACCCTGAAGCGCAATGCTTTAGGCCAGTGGAACCAGCAGCGGCGCCATCACCGCCCA
CACCGGCCGCGTTCTCTCCCGCGCCTCCGTTCCGTGCCCAGCCTCTCACGTTCACGACGG
CCACGTTTGCGCAAACCAAGTTCGGCAGCACCAAGCTGAAGACGAGCAGCAAGCGCGCCA
ACCGCATGTCGCCCACCGAGTTCAGCAACTACATAAAGCAGCGGGCGGTGCAGCAGCAGC
TGGCGGCGCGGTCGATGTCGCCGGCGCCGGAGTCGTACCTGGTGGGGCGGCGCGACCCGA
CGCCGGGTAGCGCGTACCCGCCGGCGCCCTCGCACCTGCTGCTCGCCAACTGAGTCGCGA
GTCGCGCGACCCGCTCATAGAGTCTTTACTTTTTTACGAGAGAGAGACGCGCGCCGCGAT
TTATTTTTTTATTTTCCGCGGGGGCGTCCCGCGCCGCCCGCCGCTTGTGATATCCGTACG
ATTTTCCATAACTTTTTGTATTCTCGTTCGTTACGTCGATGTGTAAATTAATCGATAGGA
GCAATAATGATAATCAGCCGCGTGACTCGCCGGCGATTTATTTTCGTAATATTAAAGCCG
AGTCGTTTTTTTATGTCTTCGTTCGATATCGATATATTAGTAGAGTGTAAGAGAGCCAGG
GGCTGCAGGCCGCGTGTGCTGACGACGTACCTACTAGAGCGAGTCTTTATACATACGTCC
TCCGATCTATGAAGTACTATTTAATTACGTATACAATATTTATATTCGTACGAGATAAAT
GTTCCTTAATTTTTCACGAGAAAACGAAAAGACAATAGAGAAATTGTGTATTTTTAATAT
GAAATTGATAATTCATAATAATATTATAATGATGTAGCGTATCGGTATGGTATACTCGTG
TATTCGTATGATATAATATTTGCATATCCGTTCGGACGCGGTCGGAAGGCGCGGCGGGCC
GCCCGAAGGCGTCGGAGATCTCACATAGTGTTATCATCACTCGTACGATTGTACCCTTAT
TATAATAAATACATTATAAAATATTAGGATTAGCTACGTTTCAATCTAACAGTATTTTTT
TAAGAAGATATTAGTCCTTGTGTAAATTTACCGGTTGACCGTACTGCGGCAACCGATCTT
AGTGTGTATTGTATATTTAATATTTAAATTGTTATAAAAGACATGAATAAATAATAAATC
ATAGAAAAATATATCTCAGTTCATTAAAATAACGGGTGCATGCAATTCATTGAAAATTGA
ATACTATGTGTTATTTATCTTTTTTATATTTCATTAGCGATCGGTGCAGTTTTTTGAATG
GGAGTCTATAGTTGTGTGCGCGGGAAAGCGTGGAATGCGGGTAGTCGGATCAGCTTGTCA
TTGTGTCGCGAATGTGAAACAGCAATAATAATTATAATGTTGACGACAAACAGAGATATG
AACCATCTCAGTTTGTCGTTGCTACACCAAATACCTAGATTATAAGTAATTTAGGAGATT
CGATGCACAATATTGACAAGTTGTACCACAACGGAAATGTACAAGTATTTTTACTATTTT
TATATTTTGATTTAGAGTTAAGTCTAGCTGTATGAGTTCTATACCTTAAAAGTGTACTTT
ATTGATGTTCTATTATGGCAACATGTAATACAACAGGCACATGTTGTATTACAAATTACA
TGAAATGTATTTTCAATGACTATCCTTTAAAAAACTGACCGAGATGCTACAGTATTTTGT
AGATAAAATCTATAACGTAAGTTTAATATTAAAACAATTTAGTGTAATGAAATTTTTTAT
TGTAAAAGATACTTTTTATTTTTCTTTCCTTTTGTAAGATAATATTCGATGAAGTGTTAA
AGATAATATAATTAAAATATTTGCATAATATAGTAAAAGCGGCACTCCATGCCGGCTAAT
ATAATTAGTCAATAATTTTTCAAATTGTTGTACGACTTTTTAAGTTTATATTAAAATGTT
TTGTGCAATCTAAAAAAAAAAAAAAAAAAAAAAAA
(2855 bp)

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